Genomic Feature

ihb580

ID
ZDB-ALT-220209-6
Name
ihb580
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
Lab of Origin
Yonghua Sun Lab
Current Source
China Zebrafish Resource Center (CZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 24: 7993933 - 7993941 (GRCz11) (1) Details
Nucleotide change
CAGCGTG/-
Variant Notes
Between 181 bp and 187bp of the wild-type bloc1s5 coding sequence, CACGCTG is  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted in Exon 3 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TTCTACTGTGAACAAAAAGACAAAAGTCAATTTTTTCCCAGTATTTTCTGTTTTTTTTTGGCAGTATTTCCATCGTACACCCGCACACATTTTGATTTAAATACACTTAACATTCTCAAGCAATTGCGTGGAACATGTGCAAATGTGCTAATTAGCATGGACCGCTGTATAATTTCAGCATCATTCCACAATTAATTAGCAAAACTACAGAGGTGGCAAAAATGATAAAAACACTTGCCATATTTAAGAGTTGTTTTTAATTGCACATTAAAATATTCATAAAATGAATTATTAATGAAGTATTAACTGTAATCTTTTTAAAAGCACAATCTTAACATATTATCTGTATATCCATTAAATAGTTCCATCTTTTTTTAAATACTAAAACGCAGTTTTTAAGTACCTCTTAATTTTCTTTCACTTCATCACGCCATTTATTCTAAATAATGTGACTTACGTCTTGTGAGAGCGTCACACAGTTTCTCGTGCATACTCTCTGT
CAGCGTG/- CAAATCATGCTCATTGGTGTCTGACGTCATCTTATTCAGATTTTCAAGCAAGCGGCATTCTCTGAAAGCACGTTTCTCCTGGGGAATATTAACAGAGAAAATTAATTAGTGCAGTAAATTTGGTCCTTGTCAGAAGGTCACAGGTCAAAAAATCTTTGACTCAAAGGATGATGTGAAAATAGTGTCTGTACATCATTACGGTATGTCAATGAACATATTTATACGACAAAGCTGTATAGGATCATTTCAAATATTTTTAATTGCTTTATTTCAATTGTACATGTCTTAGGCAAAAAAGTCTTAACAAATTATTTCTTAAACACTAAATCAGTATTTCAGAAATATTTATGAGGGATTTTGTGTTATACTGAGTACTGAAGTAATGCAATCGCAGGAATAAATCATATTTATCATATTTAAATTAAAAGCTTTTTTTATACAATGTTATAACATTGACAGTATTCCTCTTTTACTGCGTTTCTATCAAATAATGAAAGTCA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations