Genomic Feature
mde402
- ID
- ZDB-ALT-210830-2
- Name
- mde402
- Synonyms
-
- mde402Tg (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Maier-Begandt Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 9: 44978206 - 44978218 (GRCz11) (1) Details
- Nucleotide change
- CCTACCCTGTGTT/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 13 bp deleted in Exon 2 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
ATATCTTTTTTTTCATGCACTTTTATTTGTATAAAAAAAACATTAAGTTAACTTAATAGATTTGTATTGGGACAAGATGAAAGAATTGTGTACCCAGGATTTTTGCAGTCCACTGTAAAAATCCTGGGTTCCACACAATTCCTTCATGTTGTCCCAACAAAGATTAAGTTAATTCAAGTTGATTGAACATAAAATAATAACCTAAGTTAACTTATTTGTTTTACTAATTTAAGTTGATTGAACATAAAACAATTAAGTTATACCACCCCCAACAAATTTCAAGAGTTGTGTTGATTCAGCTCATTTCTTTCACCTTTTAAACACAAAAGATGATATTTTGAAGAATGTTGGAAATGGTAGCCATTGACTTACATGGTATTTTATTTCCTGTGTGTCAATCATCTTTTGTGTTTAAGAGAAGGAAAGTAAATGATGCTAGTATTTTCATTTTTGAGTGAACTTCCCCTTTAAAGAAACCTTCACAAGCTGTATGTCATGTA
CCTACCCTGTGTT/- CCCACCAGCAACAGCAGCAAACTCTTCAGACACACTGACTGATGCATCTCCTAAAACGTAAACAACATTCATTTGTATTATTACAGCGCCTTATTTTAGCTTTCCAAGCGACTGTTATAAATGCAAATGAAATTACCAGTGCTATCTTATTTAATGACGCACACAAACCTTTTTTTATTTACTCCTGCACAGTTTTGCAGCAGCTGTGCAAGGTGTTGCACAGAAAATTTTTCACACTTTATCAGAAGATGTTTTTAGCAGATGTATGTGGTACGCTGTGGGTGACACATCTCAGACTGAGGAGTGACTACCATAGACGGTCAAATGATCTGCGTACATGACATTCATTGGTTCGTCATGATTTCCTCGTATCGCCCTGTGAAACACGCTTGCTTTCCCACACAGTGAGTATAAGTAACGCCCATTTACAAAATATTAAATGCTTACAGGAATGTAAATAAATGCAGGTGTGAAGTTGTTTCTATTGTGAAGCTAAATCG - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| itgb2mde402/mde402; nz50Tg; y1Tg | Complex | 4 figures from Bader et al., 2021 | Fig. S3 from Bader et al., 2021 |
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Supplemental Information
- Genotyping protocol
- None