Genomic Feature

va5

ID
ZDB-ALT-210225-1
Name
va5
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Thisse's Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 12
Variants
Variant Type
Delins
Variant Location
Chr 12: 35501654 - 35501661 (GRCz11) (1) Details
Nucleotide change
CATCTCCG/TTTTTT
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
6 bp inserted / 8 bp deleted (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTTTTATGCGTACGCACATTTACAGCTTTGTGCGTACGCAATGTTTTAGTAAGATTTCCACGCAAGTCTTCGTACATGAGGCCCCAGGTGATTCATCTAACTAACCTCATCATTTTTAAAAGAAGGGCATTTGATTGGACAAATAAACCAATGGAAGCGTCTGTGAATGCAAAATTAGTCACAGTATTATCTGTCCATTATCCCAGCTCACTTAAATGACAGTATCTGCAACAAGTTAATTACCATTTGTCAACTTACACAAGCATGCAACCACACAGACACCCTCGAAAAAACAGACATGGACTAAAGGCCTCAAAACAACTTCAGATCTTTTCTCCTCCCTTCAGCGCAAGTAAGGAAAAAACAAAACACAAAGCATCTTCATCCCATTGCACTGTATGCATTTAAAGAGTGCTGAATAAAAAGCCTTACCTCTTGCTGACAATTTTTTTGTGTTAATAATTTTAGCAGCATATTCCTGGCCAGTGGATTTTTTCACA
CATCTCCG/TTTTTT CACCACGGAGAAGGCACCCCTGCAAATGAAGAACACAAGGCGCTTAATTTCCCTCAAAAACAAACAATGCACCTTATAGCGCATGCAAATGAGCTGTCATTCATTAATAACGTAATGGCAGTGCTATTATAAATTAGTGAAGAGAAGTCTGACAGTTTGCTTTGAAGAAATGGTTCCAGCGTCGCATGTTATATGCAATAAAATGTCAAACCTTATTTATTAAAGGAATACGTCACCCTTTACTCACCCTCAGGCCACCCAAGATCTGATTGATTATTTTAGTAGAACAATAAAAAAGACTTTTAGCTGAAAAAAATGTTCCTTACTGATTCATAAAATGCAAGTCAATGGCAGCAATTTGAGACTTCAAAACACAAATAAAGACTAAATAAATTAATAAATATAAATACAAGTGGCACCTCACCATACTTTGAGGTATTACAAAGCAAAGAAAATAAGAACATTATTTAACACATTATTTACATTTTTTTTGTCACATA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
camk2g1va5/va5Homozygous♀+/- ♂+/-3 figures with image from Rothschild et al., 2020Fig. 7 from Rothschild et al., 2020
camk2g1va5/va5 + MO1-camk2g1Complex2 figures with image from Rothschild et al., 2020
camk2g1va5/va5 + MO1-camk2g2ComplexFig. 7 from Rothschild et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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