Genomic Feature
pt543
- ID
- ZDB-ALT-201015-10
- Name
- pt543
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Beth Roman Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 5: 21211268 - 21211275 (GRCz11) (1) Details
- Nucleotide change
- CTGCTCCA/T
- Variant Notes
-
c.del134-141insT
p.Thr45Metfs*27
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 1 bp inserted / 8 bp deleted in Exon 1 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
GAGAGAAAGTAGAGAGCAAGAGTGAGAGAGAAAGAGAGAGAGAGGAAAAAACATTTGAAAAGAGATGGCACAGAGGGACATCTCTTTCACGTACTGAAACCACCCTCAAACTTTTCAGACATCAAAAGGTGAGAAGAAGAATAAATGCTCAGAGTTCAGGAATAGAGGCACTTTATTGCAGGCATCAGTGTGAGGCTACATATTGAACCAGAACAGCAAGGACAAGTCTACTATCTTAAGTTTTGCAGTGGAGCGTCAACTAAACTTCTGTCCAGGAAAAGTTGTGTACTGAAATTAAGTGCTTTTGATAGTGGATCTATAGATCTCACCTCCTGCACCTATAGCTAATACACATTTGTCTTGCGTCATGGCTGGTAGCAGAAATCACTTTTGGATTATATTTTCATCTGCCACGTCTGCTTTATTGGCCTTTTTCCTGCTTTTCTGGGGGCCTTTCTGTGTGCAAAGTAGCCCCATCAGCTCCCCGGAGAGGCACCGCA
CTGCTCCA/T GGGTTGGATGATGGACATGGAGGCGTTTTGGATCCTTCACTCTTGGAGCAGGACAGTGAGGCGAACATGCAGAGCTTGATGGAGACCCTGAAGGGACAGTTTCTGCAGACTTTCAATCTGACCCGTCCCAGCTCTCCTGCGCATCAAGGGGCCACTCGTGTAGAGCCACCTGAGTATATGCTGGAACTCTACAACCGATTCGCCAATGACCGAACAGCAATGCCTTCGGCAAACATCATACGCAGCTTTAAAAATGAAGGTAACTGCATATTTTCCTATTCAATGAGGGCATTATAATCATTTGTATCGTAGGAATTTGTTATTTTTTTGTAAAAGAAAAAAAGAAAAAAACAACAACTTATTTTTCGACTGTTTATGTGATAAATAATGGTTTCCAAAATAATAATAATAAATGTAACGGTAACACTTTATTTTGATAGTCCATTTGAGTATTAGTAGACTGTCTGCTTAACATTCAACAGATATTTAACTGACTATAA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None