Genomic Feature
um216
- ID
- ZDB-ALT-200928-2
- Name
- um216
- Synonyms
-
- 5 bp deletion (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Lawson Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 20: 39593988 - 39593992 (GRCz11) (1) Details
- Nucleotide change
- CTCCG/-
- Variant Notes
-
mutation induces a frameshift at aa 52; additional 2 aa then stop.
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 5 bp deleted (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- None
- Flanking Sequence
-
GAGTGAAAAAACTAAAACTTGTTTCCCCTCCTAACACAATATATTTTATTTTGAGAAACATTTACAATATTTTGGAGCAGTAAACATGTCAGGCAAATAAATCAAATGTATCCTTGACTTCTGCTGTCTTCATTAGTTTCAAAAATGGACATCTTTTTAATTTAAAATGGCATCTTGGGATATCTTTTCTGCTGGAGATACTGACATCAAAAAGCTTACATATGGCGTAGGAACGGTAGAGCAGAAAGTTTTGCCAGTTTTAAAACCTTGACTTTTCCAAATCGTGGTAAACCTTTAGAACGGTTATCATCCCCAACTGCAAGGACGTGAACTCACCTGTTTCTCAAAAGCTGTTGGCACCAGACGACGCAACTCTGATAAGCTATTATTTATCCGGTCCCTTCTTCTTTTTTCAATGATCTGTAATATATGAAATGTTTAATGTGTTTGAAATATTTAACAAACATTTAAAACATCGATAAAAAATATGAATTACCCCT
CTCCG/- CTTCTTTCTGGCCATGACTTGGGATGTCGTTGTAGGTGAGCCACATCTTATAAATGAACCATTGCTTTGGCTGGGAATAAAAAGGATAAATACATATCAGTACACTGCAAAAGGGTTTTGTTAACTTTAAAAATTAACTTTTTTTTCCACATTAGTTTTATTTTGATTTTGGACAAACAAATCTTGTAACTTTAGATCAGGGGTGCCCAAACTTTTTCTTATGAAGGGCCAAAAGACAAGCATGACTGCTGCGGGCCGAATGTTATGTGAGCAAATCTATGCAAATGTCAAACTTGTCGTGAAAAAAATAAAGTTGTCACTAAAATACGGAAACCATTTCTAAGTTTTTTGTGCAAGCAAGTATTTTACTCTACTTCAGAAATACTCAAAAATGCATCTGTCAATGTTTTCAAACTACTATATTGATTTACAAGTTCACATTAAGTTTGCAAGTTCACATCCGTCACATTCACAACAAAGAGATGTCACATACATAACCA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None