Genomic Feature

ecn2

ID
ZDB-ALT-190830-5
Name
ecn2
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Zhen-Yu Du Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 18: 8349137 - 8349141 (GRCz11) (1) Details
Nucleotide change
TATGC/-
Variant Notes
exon 2 deletion of TATGC at 78bp , premature stop codon at amino acid 82aa
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 2 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTTTCTATCTATCTATCTATCTATCTATCTATCCATCCATCTATCTATCTATCTATCTAGCTATATTATTCCATCCATCCATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCAACTAGCTATCTATCTAATGAAAGTCATCTTTTTCTTGTTTTGAGCAGAACAGTGTTCTGACCGGTGTTTACCCTGCCAGTCCTTCAAGCTGGTTATTTGTAGTTATTGCTATAATGAGCACCATG
TATGC/- CAGGATCGACCCCTCCATGGGCACGATTGATAAAATCAAGACATCTCTACCAGTGAGGTAAATTAACAGCAGATCTATGAAAGATCTATGTTAGATAAAAACAGATGCATAAAGCTGGGAACATGGATGATTAGTGCATAAAATACCCGTGTAGATGGCATGCAAATGATTTTTAAACTGATTTTTGTATTTATAATGTATAATAAGTTAAAATTCTGATAAAGAGAAAACATTTAGGCAGTGAATATCAGTGTTTTGTTAAGGATTGTAGGTCTTGGACCACATCATTTTGCCTGATATGTTTGATCAAAAATATAAATACAACTGATATTACCAGTTCTCGGTACTGATTGGGCAACACATATATTTTATTTACTGTTAAGCAATGGATTTGGCAGCTTCGGTTTCTATTTACAGATTCATTCAGTTGAATTTGTGCTTCATCAGATGAAGCACGTTACACATTGAAATAATTTTTTGCCAACTACTCAGTCAGGGAC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations