Genomic Feature

tsu26

ID
ZDB-ALT-181126-1
Name
tsu26
Synonyms
  • cd8 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Meng Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 61472185 - 61472192 (GRCz11) (1) Details
Nucleotide change
ATGTGGGA/-
Variant Notes
the premature stop codon leads to the lack of the catalytic domain of the  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted in Exon 3 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
TAGTAATGTGGGCTGGTGTGGCTACAGTGCCAGGGCTGATTTAAAGTCCCAGTCCGCCCCTAAACGATGGTTTACTCTGCAGACGATCAGAAAAAAAAGCTTAAAGGGGCTAATAATTTTGTCCCTAAAATGGTATTTAAAAAGTTAAAAACTGCTTTTATTCTAGCCGAAAAAAAAACAAAACAAATAAGACTTTCTCCAGAAGAAAAAATATTTCTGAAGTATATAAGTCCTGAAGAAACTGAAGTATGGGGTGACGTGAACAAAATCATTGATCCATTTAGGTGGAAGTGACAAACTGCAGGCTTTGGATGCTTATATCAGTTTAATATCTTCTAAACCTGGGTTTTATCACGGTTTTGGAGCACACTAGCTTATAGATATTCTTAAAACTAACATACTGATACTAAAAACTAGAAAACCTTTATTTTAATTTCATGAGACATCTGTCTATCCAAAGGACTTTGGGCCAAAGGTGAACTTCAAGAAGCGCCGTGTCC
ATGTGGGA/- AGCTTCAGCGGCCTGCCTGCTATCAGTCGTCGGCTGCTGGTCCGGATGTCAGATTTACCCCAGTTATCTTCGTTCAAACCAGTGGAGCAGTGCAACCTGGACTATGATTCTCTCAGAGGCTCCGCCATCGACCCACACTTAGACGACAGCTGGCTGTGGGGAGAAAACCTGGTCACCGTTAACCTGCTCTCGGACACCGTTCTGACCTTGAGCTTGGATCAGGGCTGGGGAGACATGGAGCAGGGCGAGGTGAGGGTGGCTGTGCGTCTTCCCCGCAGGTCTCTGGTTGTGCTCTACGGAGATGCACGGCACCGGTGGAAACATGCCATCCACAGAAAAGACATTCACGGCCGCAGAGTGTGCAGCACCTTTCGGGAGCTCTCGGCTGAGTTTCTCCCCGGAGGACAGCAGGAGAAACTGGGCTCAGAGTTGTTGGATATAGCGCTGAGCTTCCAGGGTGCTCCTCTATAAGACAGCTCCACTTAGATGCATGTTTGTTT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations