Genomic Feature
s4001
- ID
- ZDB-ALT-181015-1
- Name
- s4001
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Slavotinek Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 8: 19669079 - 19669083 (GRCz11) (1) Details
- Nucleotide change
- TGCAG/-
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 5 bp deleted from position 296 to 300 in RefSeq:NM_001079682.2 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Amino Acid Substitution: Val>Ala (1)
- Flanking Sequence
-
GTCAATCGTCACGAGGCGACCTGTGTCGTCACACTGCCCGCTCTATAAAACTCCCCCCGTCTCACTCACCTGGTTAGACAAACACCTCTCTAATCGACAGCTGAGGATATACGCGCATTTTATTACTACTGCCCGTTTAGTTTGGCAAATTTAGGTAAATAAAATTCTGAAAGTTCTAAAAGTTAAGCTTTATTAGACAACTTTTATGAATCTTGCAAACTTTTCATATTTCACGGGCATGTGCAACATGACGGCAGAGTCCCAGCACTCACCAGCCGAGGCGGCCAGTCCAGTGGTGGTGTCTCCAAACGTGAGTCTGGACTCCCCGGTTCCTCTTCCACCACTTGCGCTTAACCACCAAGCTCGAACTAAAGATGGCATTCTCATCAAAGCCGAGCCTCAAGGCAGCAGTCCAAACACAGACAGAGAGGAAGTTGTTTCATTGGGTCAAACCGAAGAACATCTGCCCGCCACTGGTAGCCGGCGGAGGAAAAGGCCAG
TGCAG/- CGAGGTAAACCTCCATACAGTTACATCGCACTGATTGCAATGGCCATCGCCAATTCACCTGAGAGAAAACTCACACTCGGCGGCATCTATAAGTTCATTATGGAGCGCTTTCCATTTTACCGCGAGAACTCCAAGAAGTGGCAGAACTCCATACGGCATAACCTTACCCTCAATGACTGTTTTGTGAAAATCCCCCGGGAGCCCGGTAGGCCCGGAAAAGGAAACTATTGGACGCTTGACCCTGCCGCTGAGGACATGTTCGACAACGGGAGCTTCTTAAGGCGGAGGAAGCGCTTTAAGCGGACTGATGTCAGCACCTATCCAGGTTACATGCAAAGCTCCAGCGCTTTTACGCCCACACCTATGGGTAGACAAGCGTACCCCAACACCTTGTACCCGGGTGTGACATCTGGCTACGGGTCTCAGCTGGCTGGTTCCCCACACCCGGCGATGCTGCATCACTATCAAGCATCGGCCGGGGTCACGCAGGGCCAGGCTAG - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None