Genomic Feature

y535

ID
ZDB-ALT-181009-3
Name
y535
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Porter Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 2: 3833570 - 3833577 (GRCz11) (1) Details
Nucleotide change
TCCTGCTG/CTGTGCCTC
Variant Notes
NM_001243875.1 (npc1_v001): c.153_160delinsCTGTGCCTC. This mutation results in  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
9 bp inserted / 8 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TAATATTTTATTTATCTGTTTAATTAATTATCGGTTTATTTATTTCTCAGCTTAATTAGTCTGTTTGTCCATTTACCCAATATTTGTTTTTCCTCCTATGGCTGCCAATGGTTACAGGTTTTCAATACTCTTCAAATTATCAAATGCTTTCAGAATTAAACAAAAAAAAAAATCTCAAACTAGGGTTAGAAACATGTCAATAATGAGTAAATTATGATTTTTTTTATTTTGCTGAAATATCTCTTTAAGACATTTACAAAATTAAAGTGATTACAACATAGATATTGTCCAACAGAGCATTCTTTTTGTGTACAGACATTTTAAAAGACTTTAAGGCTTATGTTTGATGGTTAAAATCCATCAAATCTCCTGTGTGATTTATTTTGTTGTTGTTGTTGTTGTGTGTTCACTCAGGTGCATGGCCAGCACTGTATCTGGTACGGCGAATGTGGGAACTCCCCAAACGTCCCAGAAAAGAAGTTGAACTGCAATTACACCGG
TCCTGCTG/CTGTGCCTC TGCCTCTGCCTAATGAAGGACAGGAGCTGCTGCAGGTATGACAATCCACTTTTACACCGTTAGCTTTGTATCGGAAACAGAGATAAAAATTACAATGTCACAATTTTTTGGCTAGATTAACTAAATGATTGATCGGATGATAAATTTTAGGTTAAATTGAAATAAAAAATGGCAAGATTTAAAGGTACGATTCTACCAAAAAAGTACATTTCCTCACTTTTTTTCAATATAAGATATTCTGAAGAAAGTTAGAAGGAAAAAAAATAGCATTGATATCCTTTGATATGGCTAACTGATTTTTTTTATCTAACATTCTTCATTATATCTTCCTTTGTAAAAGAAAGAAGGGTTTTGTTTATTTATTTTTTCTCATTAAGACATCCAGTGAATTATTTTTTTAAAAATGTTTTTTTCTAAAGGAGCTGTGTCCGAGACTGGTCTACGCAGACAACAGAGTTTGCTGCGATACACAACAGCTCAACACACTAAAAAGCAACATC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations