Genomic Feature

ihb308

ID
ZDB-ALT-180816-5
Name
ihb308
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Wei Hu lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 7: 64967792 - 64969882 (GRCz11) (1) Details
Nucleotide change
TTGGTCAGCTTGAAGCCAGGTCCTGCTCTTGCATCTACCACCTTTGAGGAAGGGAAAAATACTTCGGTAAATATAACCAAATGTCTAGAATACAACAGATGACTCCAGGAGAATGAAGAACAGTCACTTACATGGTTCCAGTTCTTCTTTGATCCATGCGGTAACTTCTTCCAGCGTTTTACCAGGAGCACACAAGCATTGCAGATGTCTCCGACTCGATCCTCTGACAGACTGAGAGCAAAACAAATCAGAAGGTGATAATTAATATTAAACAAGCTAATTTTTTCAGTCATGCAATAAAAATATCACCATCCAAAAAACAAAAGCAGTTTTAAACCCTATTGATCAACACAGGGAATAAAAAGGTTAAAGCTATTAATCCTCCTGAATTATTTTACTATTTTAACTATTTTAAAAAAATCCTATTAAAAAAATAAAATTGCATTGGGAATAAATGCCTTCTAATACTTAGCCTTTTTTGCTAAAGAGATTTTATACAATCTACCAGACAGAAGTGTTTTGTTACAGCAGGGCTTGAAGAGACGAGGATCGATGATCACTTCACCGAAACGGTCCTTGTAGACGATCGCTACATTTACTGACCGTGAAAATTTACTTTTGCTTTTAACAGAGAGGGAGTTAAACCAGGTTACAACGTTAAAAGGACAGATTCAATAAGTGATTTATATAGAGCGGGGTGAATTTGCCTGAAATAAAAATTGAACATCTTAACTCGATTCCGATTAATGAACGATTATTTAATTTTTTTGCCCTCATAGTTCACTGACAAGTTTTATATGCCATCTAAAGGCATCTCTGGCGCAGCTTCCAACCTGTGAAGTGCAAAGCAAGGCTCAAGAATGAGTCCATCATCCTACTTGACCTGAGATCAGATGTGGCTGCAGAAGTAGAAATCAGCAACAGCCTTTAACAGAGCAGGGTCACATGACATGTAGGCAAATTTATAGACATTTTTTTTTTTAATCGATTATAGGTTTCGAATGTCGATTTCGATTAATCGCCCAGTCCAAGATTTATTATATGACAATCAAAATGTCCATCTCAATACCAAAACTCATCATTATTATCATTGTAGCAGTGGTTTGTTCTGTAGACAATCGAAAGGAAATATTGCTTAAGAGGGCTAATAATATTAACCTTAAAATGTTTTTTATTATTATGTAAAACTACTTTTATTCTAGCCGAATTAAAATAAAAATATTATAGGAAATACTGTGAAAATCCTTGCATTGTTAAATATCATTTGGGAAATATTTGAAAAAAAAAAAGGAAAAATATTCACAGGACGGTGAATAATTTTGACTTATACTGTATATTAAATGCGTTTCCATTCATTTAAATATAGTTAATTGATTGCATTCTCGATTTTTTTTTCATAAACAGTGTATACAATTTATACATGCATTAACAAATAGGCAGATCATCTTTAACAATGAATAAAAAGAACTTCAAAAAACAAACAAAAAAAGAGAAAAAAAAAACAGCTAAACACAGGGGGTTTATAAAAAAATACATATTGAACAGACACAATTTTACTCATTAAACTGGGAAAGAACAGCAGACAGTTGACGTTTTAAGAGCCTTTTGAGACAATTGAATCAGTAAAAGGTATTGTTTAAATACCTTCAAAAAAAAATAAACATAGGTCTGGAGTTAGAGAATTTTTACTAATGAATTGGAAATTTAGCAAGCAGCAAAATTAAGTTCACCACATGCAACTGTTTACTTTTAGGTTGTTCATATTCAGTACAGCCCAATACTACATCTTTATATCCAATACAAAGTACATTCACTATAAATTTTACTTCGAATAAAATTCAAGTCATTTTTCCTAATTTTTTTTTGTGAATGGACATTACCAAAACAGATGAACAACAGTTTCAAAACAGTCATCACAAAAGGAACCGTTGGAGGAGATTTTTCATTCTCGGTTTCTTTCATTAGACCTGCTTCCAGATGACGAAAGGCATTCCACCGGCATTCCTTGAGGAATGTTTGGGATACGTGCAGCGTCAGGGGAAGACACTTACCCGAAGCAGAGTCTGAAGTTCTCCTCATATCTGCTGCTGT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2091 bp deleted (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CAGAAATATTAATTTCTACAATCTCATTCGTACATTTTAGCACGATTTACTCATCCCCAAATAAAGGGTAGGTTTATTAGTGGGATTCGGGGACATCCCTGCTTTTAAAGAAATAAATAAAAACTATGTTTTAAAACTAATAAAATTGTATGAAATCAAACAAATTAGCAACTTTTTCTGACAATATATAAAAATAGCACCGTTTCATGATGAGATTGGGCTGAAAATTAATTATCCGCATTTGTACAATGTGAATCATGACTCAAATAACACACATAAAAACTGAACGTCTGAAGATAACTCTCAAAGAACAGAAAATATGAACGCATACAAATGAGATTACCATAAATTCCACGAAATGTAAACATAGTTTCAAGGTGCCAGGAGATTAAGTGCTCAAAAATCAAAAATAAAACTGGGACTCACTTTGTCTTTTGAATTTATGAAGCTTTTTCAGCTTACTTTTCTTCTTTCCATCAATGTTTTTCACTTTCTTGGGT
TTGGTCAGCTTGAAGCCAGGTCCTGCTCTTGCATCTACCACCTTTGAGGAAGGGAAAAATACTTCGGTAAATATAACCAAATGTCTAGAATACAACAGATGACTCCAGGAGAATGAAGAACAGTCACTTACATGGTTCCAGTTCTTCTTTGATCCATGCGGTAACTTCTTCCAGCGTTTTACCAGGAGCACACAAGCATTGCAGATGTCTCCGACTCGATCCTCTGACAGACTGAGAGCAAAACAAATCAGAAGGTGATAATTAATATTAAACAAGCTAATTTTTTCAGTCATGCAATAAAAATATCACCATCCAAAAAACAAAAGCAGTTTTAAACCCTATTGATCAACACAGGGAATAAAAAGGTTAAAGCTATTAATCCTCCTGAATTATTTTACTATTTTAACTATTTTAAAAAAATCCTATTAAAAAAATAAAATTGCATTGGGAATAAATGCCTTCTAATACTTAGCCTTTTTTGCTAAAGAGATTTTATACAATCTACCAGACAGAAGTGTTTTGTTACAGCAGGGCTTGAAGAGACGAGGATCGATGATCACTTCACCGAAACGGTCCTTGTAGACGATCGCTACATTTACTGACCGTGAAAATTTACTTTTGCTTTTAACAGAGAGGGAGTTAAACCAGGTTACAACGTTAAAAGGACAGATTCAATAAGTGATTTATATAGAGCGGGGTGAATTTGCCTGAAATAAAAATTGAACATCTTAACTCGATTCCGATTAATGAACGATTATTTAATTTTTTTGCCCTCATAGTTCACTGACAAGTTTTATATGCCATCTAAAGGCATCTCTGGCGCAGCTTCCAACCTGTGAAGTGCAAAGCAAGGCTCAAGAATGAGTCCATCATCCTACTTGACCTGAGATCAGATGTGGCTGCAGAAGTAGAAATCAGCAACAGCCTTTAACAGAGCAGGGTCACATGACATGTAGGCAAATTTATAGACATTTTTTTTTTTAATCGATTATAGGTTTCGAATGTCGATTTCGATTAATCGCCCAGTCCAAGATTTATTATATGACAATCAAAATGTCCATCTCAATACCAAAACTCATCATTATTATCATTGTAGCAGTGGTTTGTTCTGTAGACAATCGAAAGGAAATATTGCTTAAGAGGGCTAATAATATTAACCTTAAAATGTTTTTTATTATTATGTAAAACTACTTTTATTCTAGCCGAATTAAAATAAAAATATTATAGGAAATACTGTGAAAATCCTTGCATTGTTAAATATCATTTGGGAAATATTTGAAAAAAAAAAAGGAAAAATATTCACAGGACGGTGAATAATTTTGACTTATACTGTATATTAAATGCGTTTCCATTCATTTAAATATAGTTAATTGATTGCATTCTCGATTTTTTTTTCATAAACAGTGTATACAATTTATACATGCATTAACAAATAGGCAGATCATCTTTAACAATGAATAAAAAGAACTTCAAAAAACAAACAAAAAAAGAGAAAAAAAAAACAGCTAAACACAGGGGGTTTATAAAAAAATACATATTGAACAGACACAATTTTACTCATTAAACTGGGAAAGAACAGCAGACAGTTGACGTTTTAAGAGCCTTTTGAGACAATTGAATCAGTAAAAGGTATTGTTTAAATACCTTCAAAAAAAAATAAACATAGGTCTGGAGTTAGAGAATTTTTACTAATGAATTGGAAATTTAGCAAGCAGCAAAATTAAGTTCACCACATGCAACTGTTTACTTTTAGGTTGTTCATATTCAGTACAGCCCAATACTACATCTTTATATCCAATACAAAGTACATTCACTATAAATTTTACTTCGAATAAAATTCAAGTCATTTTTCCTAATTTTTTTTTGTGAATGGACATTACCAAAACAGATGAACAACAGTTTCAAAACAGTCATCACAAAAGGAACCGTTGGAGGAGATTTTTCATTCTCGGTTTCTTTCATTAGACCTGCTTCCAGATGACGAAAGGCATTCCACCGGCATTCCTTGAGGAATGTTTGGGATACGTGCAGCGTCAGGGGAAGACACTTACCCGAAGCAGAGTCTGAAGTTCTCCTCATATCTGCTGCTGT/- CAGTGAACCGAGAACTTGACGACTTGGTTTTGCAGATACAGCAGCCGTCGTTACTGCGGTAAATCTTGGATTTGTGAAAT  ...
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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