Genomic Feature

um287

ID
ZDB-ALT-180814-5
Name
um287
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Sagerström Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 8: 40629411 - 40632265 (GRCz11) (1) Details
Nucleotide change
TCTCAGGCAGTGAGTTGGTTCAGATTTTGCGGACTCCCTCGGAGCTCTTCGCATCCGGCGGCTGCATCGTGCTGGACTGCCGGCCATTCCTCGGTTTCTCCCGCGCGCACATCCTCGAGTCCCGCAACGTCAACTGGAACTCCATGCTGAGGCGCAGGTCCAAGAGCTCCGTGGTGTCCCTGGAGTGGCTGGTGGCGGATAAGTCTCTCCTGGCCCAGCTGAGGAACGGGGACTTTTCTCCAGTGGTGGTCTTGGATGAGAACAGCCGGTCGGTGAGGGACCTGAAGAGCGAGAGTTTGGCCAGTCTCCTCATCAGCGCCCTTCAGTCTGAAGTCCAGTCCGCCTCGACGCACATCTGCTTCTTACAAGGTAAACTTCAGCTTTACACAACTGCTGTCATTTAGGTATAAACTATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATTAATTAAACGACTCACAAAATGTCAATTAAAATAGCCATAATGACTTAACATCAATCAGTTTTCTTACACCAACGAATGTAATTAAATAAAGCATTTCTCCTTATTGTGAGCATTTTTTCACCTTTAATTTTATTACATTGGGTATTAATAGATTAGAAATAAATTTGTATTACTATTAGGTAAATAGACAGATAACAACTTGCAGATATTTGACGGTTATACAGAGCAGAAATAATTTGTTTATGGCAAATGTAATCTAATCTAAATCACACGGAAGTCTTCTTTTAGTTTGTCAAAGACAGATATATTATATAGTATATTATAATATTAATACTTATATATTTATTATAGAAATGACATAAAACAAGAATAACACAGCGACACATTAAATAGCTTATGTATTAAAATAAACTGTCTTTTGTAATAAATTTACAATTGCTATTTGTTTTAGTTTGTTTTGTTTATGTTACATTAAAATCGTATCATAAAATGGCAGCTTGAAGAAGTGGGGGAGGGGTAGTTTTAAATGAAAGAAATATCTACTTAATATGACTTGTTTTTTATATTAAATGCTTAAATTGTTCTAAAATATATTTCTATATGTATCTACAGATGTTAATTTTTTCAGCTGGTGTCATTGGTTATTTCAGGTTTAAACTACGATTTTTTAGATACTAAATGACACTGCCCACTAACAAATGTAATAAAATAAAAAACATTTCTTTGTAATGTGACAATGTTTTTGCCTTTTCTTTTTTATTAGATAGCCTTGGTAAATAGACATATAGAAGACGATATTTGATATTTCTGCACTGTATTTATTTACATTATTGTTATTATATTATCTAAATCCTTTGGTAATAGTTAAATGTAAATGAATCTGAATCACCTGGAAGAATATCGTCTACAATAGTTTATAAATGACAGACATTTTATATAGTATATTATTATATTAATATTACAATACATTTACCATATATACATTTTCACCAAAGTAAAAAAAAAATACATAAACAAAACAAGAACAATACAGTGATAAATTTAAATAACAGTTTATACATAAAAAATCTTTCTTTTGTCATATATTTCTAGTATTTTTTATTATGTTTTTTGTTGTTACTTTCATTTTAATTTGTATCATAAAATTTCAGCTAGAGTTTCAGATAGAAATGATGGGAAAGGGGTATAAATTAAATACAAACGTATCCTTTTTTTGCATTAAACAAATACTTAATCTTAAATTGAAAATTTTATAGTTTATATTTCTATATGTATTATAAAGAATAAAGTGTAGTGAATCAGAACAATACATATATGTGTGTATGTAAAAAATACACATTGGGTATACATTGGGTGTACTGTAATTTTTATTATTATTCATTTAATTATTTAGTTATTTATTTCAGTGTAAAAAAAAAATAACTGAACACAAACACACATCTTTCAAATGTCCTTCTCAGATTGTCAAACTGCACAAAATCACAACATTCATTTTTTTTCCTCCATCTGCAGGTGGATTTGATGGATTCTTTGCACTTTATCCTGAGCTCTGCTTTACCGCCCCTGCTGTCCTGTGCTCAAATCACTCTACTCTCAGTGAGCCAGAGCCCGTCATGTCCGGAAGAAAGACTCCACTCTATGATCAGGTTTGCAGAAATCTTAAAATCACAAATACATCAATCAATTACCATTTATTTTTCATTATCTTTATCAAACACTTCCATTGATTGTTTTGCTCTTTTCATTTACTAGGGTGGTCCAGTTGAAATCCTCCCCTTTCTTTTCCTGGGCAGTGCTCATCACTCGTCCCGACGGGAGACTCTAGAGCGAAATGGGATCACAGCAGTCCTCAATGTCTCCTCATCCTGTCCAAATCTGTTTGAGGAAGAGCTTCAATACAAAACCCTGAAGGTTGAGGACAGTCTGGCCGCAGACATACGTGTGCTCTTTCCTGAAGCCATCCACTTCATTGGTAAGTTCTTAATGAATAAACAGTCGCATAACTCACATATAAATCAACAATTGATCCAGAAAAGCTAACTCCCATCTTCGATGCATCTGCAGATTCGATAAAAGAGGGTGGTGGTCGAGTGCTGGTCCACTGTCAAGCAGGAATCTCTCGCTCCGCCACTATCTGTCTGGCGTACCTCATTCACGCTCAACGGGTCCGTCTGGACGAGGCCTTCGACTTTGTAAAACGCAGACGACAAGTCATCTCACCCAATCTCGCATTCATGGGCCAGCTTTTGCAATTCGAGACGGATGTTTTGTGCCCATATTCAGTACTAGAAAGAGAAAGCAGTGGTACTGCGTTTTAGAACACTTGAACTGACCTGTAGGTTTTGACCGGACACTGTGACAGATCTACAAA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2800 bp deleted (1)
Transcript Consequence
None
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CACAACATAAAAAACACGGGTAACCCCAACGACCACGTGCCGGTGGGAAAAGAGGGGAGAGCGCGTCAGCACCCATATATGGAATGTCGGCTGTGGTCAGCAAGCCATATATGGTGCTTCCTTGCGTGACGTTGGTTCCTTATGTGGAAAACGAAGGCGTGGCTGTGTGAGAGGAGACGCGATACAAATACTGTTACCAACCCCGCCTGTACTGTAGAATCACATCTGCTCACCAATAAAAGACTTTAAAACTAAGCTTTGAAAGAAATACAGAGGATTAAAGATTAAACAACTCGCTGTTCATTTTAAAGTAACATTAAACATAACAGGAACAATATTGATTTGTGTCACCTGTATTTGTTGTTTATAGTTGTAAAATATAAAACGCTTTCATACATTCTGAACGCGCTGCTGTTGATGCTGTGAAGGTTATTCGTTTCAACTCACGGCTGTTTGTTTGTCTGGAGAGGGCATCATGGGTATCGGCGACCCTCTCGAGA
TCTCAGGCAGTGAGTTGGTTCAGATTTTGCGGACTCCCTCGGAGCTCTTCGCATCCGGCGGCTGCATCGTGCTGGACTGCCGGCCATTCCTCGGTTTCTCCCGCGCGCACATCCTCGAGTCCCGCAACGTCAACTGGAACTCCATGCTGAGGCGCAGGTCCAAGAGCTCCGTGGTGTCCCTGGAGTGGCTGGTGGCGGATAAGTCTCTCCTGGCCCAGCTGAGGAACGGGGACTTTTCTCCAGTGGTGGTCTTGGATGAGAACAGCCGGTCGGTGAGGGACCTGAAGAGCGAGAGTTTGGCCAGTCTCCTCATCAGCGCCCTTCAGTCTGAAGTCCAGTCCGCCTCGACGCACATCTGCTTCTTACAAGGTAAACTTCAGCTTTACACAACTGCTGTCATTTAGGTATAAACTATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATATTATTAATTAAACGACTCACAAAATGTCAATTAAAATAGCCATAATGACTTAACATCAATCAGTTTTCTTACACCAACGAATGTAATTAAATAAAGCATTTCTCCTTATTGTGAGCATTTTTTCACCTTTAATTTTATTACATTGGGTATTAATAGATTAGAAATAAATTTGTATTACTATTAGGTAAATAGACAGATAACAACTTGCAGATATTTGACGGTTATACAGAGCAGAAATAATTTGTTTATGGCAAATGTAATCTAATCTAAATCACACGGAAGTCTTCTTTTAGTTTGTCAAAGACAGATATATTATATAGTATATTATAATATTAATACTTATATATTTATTATAGAAATGACATAAAACAAGAATAACACAGCGACACATTAAATAGCTTATGTATTAAAATAAACTGTCTTTTGTAATAAATTTACAATTGCTATTTGTTTTAGTTTGTTTTGTTTATGTTACATTAAAATCGTATCATAAAATGGCAGCTTGAAGAAGTGGGGGAGGGGTAGTTTTAAATGAAAGAAATATCTACTTAATATGACTTGTTTTTTATATTAAATGCTTAAATTGTTCTAAAATATATTTCTATATGTATCTACAGATGTTAATTTTTTCAGCTGGTGTCATTGGTTATTTCAGGTTTAAACTACGATTTTTTAGATACTAAATGACACTGCCCACTAACAAATGTAATAAAATAAAAAACATTTCTTTGTAATGTGACAATGTTTTTGCCTTTTCTTTTTTATTAGATAGCCTTGGTAAATAGACATATAGAAGACGATATTTGATATTTCTGCACTGTATTTATTTACATTATTGTTATTATATTATCTAAATCCTTTGGTAATAGTTAAATGTAAATGAATCTGAATCACCTGGAAGAATATCGTCTACAATAGTTTATAAATGACAGACATTTTATATAGTATATTATTATATTAATATTACAATACATTTACCATATATACATTTTCACCAAAGTAAAAAAAAAATACATAAACAAAACAAGAACAATACAGTGATAAATTTAAATAACAGTTTATACATAAAAAATCTTTCTTTTGTCATATATTTCTAGTATTTTTTATTATGTTTTTTGTTGTTACTTTCATTTTAATTTGTATCATAAAATTTCAGCTAGAGTTTCAGATAGAAATGATGGGAAAGGGGTATAAATTAAATACAAACGTATCCTTTTTTTGCATTAAACAAATACTTAATCTTAAATTGAAAATTTTATAGTTTATATTTCTATATGTATTATAAAGAATAAAGTGTAGTGAATCAGAACAATACATATATGTGTGTATGTAAAAAATACACATTGGGTATACATTGGGTGTACTGTAATTTTTATTATTATTCATTTAATTATTTAGTTATTTATTTCAGTGTAAAAAAAAAATAACTGAACACAAACACACATCTTTCAAATGTCCTTCTCAGATTGTCAAACTGCACAAAATCACAACATTCATTTTTTTTCCTCCATCTGCAGGTGGATTTGATGGATTCTTTGCACTTTATCCTGAGCTCTGCTTTACCGCCCCTGCTGTCCTGTGCTCAAATCACTCTACTCTCAGTGAGCCAGAGCCCGTCATGTCCGGAAGAAAGACTCCACTCTATGATCAGGTTTGCAGAAATCTTAAAATCACAAATACATCAATCAATTACCATTTATTTTTCATTATCTTTATCAAACACTTCCATTGATTGTTTTGCTCTTTTCATTTACTAGGGTGGTCCAGTTGAAATCCTCCCCTTTCTTTTCCTGGGCAGTGCTCATCACTCGTCCCGACGGGAGACTCTAGAGCGAAATGGGATCACAGCAGTCCTCAATGTCTCCTCATCCTGTCCAAATCTGTTTGAGGAAGAGCTTCAATACAAAACCCTGAAGGTTGAGGACAGTCTGGCCGCAGACATACGTGTGCTCTTTCCTGAAGCCATCCACTTCATTGGTAAGTTCTTAATGAATAAACAGTCGCATAACTCACATATAAATCAACAATTGATCCAGAAAAGCTAACTCCCATCTTCGATGCATCTGCAGATTCGATAAAAGAGGGTGGTGGTCGAGTGCTGGTCCACTGTCAAGCAGGAATCTCTCGCTCCGCCACTATCTGTCTGGCGTACCTCATTCACGCTCAACGGGTCCGTCTGGACGAGGCCTTCGACTTTGTAAAACGCAGACGACAAGTCATCTCACCCAATCTCGCATTCATGGGCCAGCTTTTGCAATTCGAGACGGATGTTTTGTGCCCATATTCAGTACTAGAAAGAGAAAGCAGTGGTACTGCGTTTTAGAACACTTGAACTGACCTGTAGGTTTTGACCGGACACTGTGACAGATCTACAAA/- GGTGCTTTTTGAGAATGCCAATGGTGTACAGCAAGACTTCTCTGGATCGCATTAAATATGGCATCTCACTCTTTAAAAAA  ...
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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