Genomic Feature
um286
- ID
- ZDB-ALT-180814-4
- Name
- um286
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Sagerström Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 25: 18327636 - 18328943 (GRCz11) (1) Details
- Nucleotide change
- GGACTCGAGAGGGTCCAACTGAAAAACGTTGTGATTGGTTGGTGTGGTGAAGTACAGTGGCTGGGTTGGGGCCGGCACACGGTTATCACACGGACTCTTGAGTCCTAACGTGCGCTCAAAGTCCAAGAGTTGACCCATGAAGTTAAAGTTGGGCGAGATGTTCGACTTCTTCATTTTGACAATGTCATAAGCATCGTTCATGGACAGGTTGAGCTTCTGCATGAGGTACGCCACTGTTACAGTGACAGAACGACTGATGCCTGCAAGGCAGTGAACAAGCACGCCACACTTCAGTCCACGGGCCTCATCTGAGGGAAAAAAAGGACAAGATGATTAGTTATCTGTGTGCAACTTACTTATGAATATGCAATTGCACATAACCTCGGTTGTCAGAATTCATTACACTCCCTGCGCTGACAAAGGGGGCCTCATTCAGTGGGATTTCTAGTGCATGACTGAAAACAACTCGCCTATTTTGTCTGAGAATGTGACGTGGAAATGGGCTGTTAAGGTTAATCAAATGATCCTTCCGCTCGTCAGGTTACTTGACAATGGTACCATTTGGGCGTGTAAATGTAGAAGTCATGGCAGCGCCCTGTCAAGGCTAACAGGATGTCAACAGTGCCCTGTAAATGGTCCTCATTGTGTGGCGAAACATTGCTCTGTCCTAGATTACTTTCAATGCTGCTTGCTTCCTTCCTGTTGAGCTCAAATTACCGCCTCCCCCCTCCATCTCCCGTTTCATCATAAGCCTTTGTGTCACAATTGCACAACCGAGGGATATGTTTCAATGCTAACAATAAAAACACTAAAGACACAATATTTTTAATCAAAACTGGGAATGCATGAGGAGCAAATTAAAATTTGATTCTTACCAATAAAGCTGATGGCTTCAGGGAAAAACTGTGAGAGGTTCTGGCTCCAGTGATCAGAGATGGGAATCTGCTTGTACTTAAACTCCCCGGCATTCTCGAACATGTTGGGGAGATTAGGGGTCACGTTCAAGATGTACTTGATGCCAAACTCCTCCAGGATATCCAGGTTTGTGGAGTCCTTAGCACAGCCCAGATACAGATGTGGAAGGATCTCCACGGGGAATGAGGGCTGGGGGTTGGAAAGGGGGCTGCCATCTGAGTCAGTTGCACTGCTTGGGTCTCGGTCGATATCCGACTCGATGTCCGAGGAGTCAGAGCTGATTCTGAGCCCTCCGAGACCCAGGACCTGGGAGGTTGGGGAACTGCTGCTTGAGGAACCGTCGAGGTTCGTCTCACACATTGCGGGAAAATCAGTTTGAAATTTGCTGAAGCC/-
- Variant Notes
-
Predicted 135-amino-acid protein that lacks the catalytic domain
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 1300 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
AAATTTCTCCACGCAAATAAGTTGGAGTACAGTACACTCTGCCATCATTACCGAAGGGAAGTCTCGTCCCAAAAACAGGCAAGTCTTCATTGAAGACAAGAAGGGCACACCTAGAAAACATCAAGGTGCAAGTGCTAAACAAAACAAATGAGTATTTGTCATTGTTCAGTTCCAGTCAAGTCTCTTTGGCACACCAGCCCCAATAAATCGGATGCTCTTTTCATTTCCACAGTCTTTCCATGCTTAAATATGTATATATATATATATGTATATATATATAAAACAAACTACTTTGAAGAGTCTTGGAGATTTAGAGTCACATGATCTCTCTCCATTAAACAGCAGCGTAGAAGCTCTGGGCACACCACATGCCCCATCAGTGGCTACTCTGGTCGGCCGTCGTCTCAAGCCAACATCAATAACGTCAGGAATCCCTTGACTAGAGTCGAAAAACAGAAACTTGCATTTCACTCGAATCAAGTCATGGCAGGACCTCACGT
GGACTCGAGAGGGTCCAACTGAAAAACGTTGTGATTGGTTGGTGTGGTGAAGTACAGTGGCTGGGTTGGGGCCGGCACACGGTTATCACACGGACTCTTGAGTCCTAACGTGCGCTCAAAGTCCAAGAGTTGACCCATGAAGTTAAAGTTGGGCGAGATGTTCGACTTCTTCATTTTGACAATGTCATAAGCATCGTTCATGGACAGGTTGAGCTTCTGCATGAGGTACGCCACTGTTACAGTGACAGAACGACTGATGCCTGCAAGGCAGTGAACAAGCACGCCACACTTCAGTCCACGGGCCTCATCTGAGGGAAAAAAAGGACAAGATGATTAGTTATCTGTGTGCAACTTACTTATGAATATGCAATTGCACATAACCTCGGTTGTCAGAATTCATTACACTCCCTGCGCTGACAAAGGGGGCCTCATTCAGTGGGATTTCTAGTGCATGACTGAAAACAACTCGCCTATTTTGTCTGAGAATGTGACGTGGAAATGGGCTGTTAAGGTTAATCAAATGATCCTTCCGCTCGTCAGGTTACTTGACAATGGTACCATTTGGGCGTGTAAATGTAGAAGTCATGGCAGCGCCCTGTCAAGGCTAACAGGATGTCAACAGTGCCCTGTAAATGGTCCTCATTGTGTGGCGAAACATTGCTCTGTCCTAGATTACTTTCAATGCTGCTTGCTTCCTTCCTGTTGAGCTCAAATTACCGCCTCCCCCCTCCATCTCCCGTTTCATCATAAGCCTTTGTGTCACAATTGCACAACCGAGGGATATGTTTCAATGCTAACAATAAAAACACTAAAGACACAATATTTTTAATCAAAACTGGGAATGCATGAGGAGCAAATTAAAATTTGATTCTTACCAATAAAGCTGATGGCTTCAGGGAAAAACTGTGAGAGGTTCTGGCTCCAGTGATCAGAGATGGGAATCTGCTTGTACTTAAACTCCCCGGCATTCTCGAACATGTTGGGGAGATTAGGGGTCACGTTCAAGATGTACTTGATGCCAAACTCCTCCAGGATATCCAGGTTTGTGGAGTCCTTAGCACAGCCCAGATACAGATGTGGAAGGATCTCCACGGGGAATGAGGGCTGGGGGTTGGAAAGGGGGCTGCCATCTGAGTCAGTTGCACTGCTTGGGTCTCGGTCGATATCCGACTCGATGTCCGAGGAGTCAGAGCTGATTCTGAGCCCTCCGAGACCCAGGACCTGGGAGGTTGGGGAACTGCTGCTTGAGGAACCGTCGAGGTTCGTCTCACACATTGCGGGAAAATCAGTTTGAAATTTGCTGAAGCC/- ACCTGAAAATAGAAGTTAGAAGTTCTTTTACATCTGATGCATATTTATTTTTCATTTTAGTGGTGACTAATATCTTTGTT ... - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None