Genomic Feature

ihb400

ID
ZDB-ALT-180328-4
Name
ihb400
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Gui Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 5
Variants
Variant Type
Delins
Variant Location
Chr 5: 44945041 - 44945045 (GRCz11) (1) Details
Nucleotide change
CGCTG/GGCTTCGTGTGACCTC
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
16 bp inserted / 5 bp deleted in Exon 1 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
TATGTCGCTGTTATTTATAAAGTAGGCCTACCACTTTTTAACATGGGTGACGGGCAGGACATTTTAAAATCAAATCAGGCAGGATTAAAACAAGCTAATATGAACCAAAATATAACAAATGGGCTGCAGCTTTTATAAAACAATAGCAGCCTTAAACACCCTTTATTGTGGTGTTTGCTCGATGTGTTGTGATATCATGAGGCGCTTTGGGAGTCTCAGTGTGAAGGAGCGGACATCATCATCATCATCATCCTCCTCGTCTCCCACGAGCTCTGGAATGCACAGGTTCCTCGTGCCAACACATGCGCCCATTGTAACGTTATCAAACCTCAGACCCTATTTATAAGCGCCGATAATCCCCATTCAGAGCAGAGCAGACTGGCCATCACCATTAGCTGTCAGGATGAGTGAAGAAGAGCAGACTAACGGGTCGCTGTCCATCAGGAAACCGTCCCGGATGCCGAAGTGCTCTCGCTGCAGAAACCACGGCTTCGTGTCAC
CGCTG/GGCTTCGTGTGACCTC AAGGGCCACAAACGCTTCTGTAATTGGAGAGACTGCCAGTGTCAGAAATGCAGACTCATCGCCGAGAGACAGCGGGTCATGGCTGCCCAGGTAACTTAGACATCCTCGACAAGGCCATGAGAGGTCATTTTGTATTTTGTATAACGTTTTAAATTATTAAATATTATTACCTCGTATCTACAGCCATCACGTGTTTAATTTCGTGTGCGTTGTTTACAAACACAAGTTGTATTTAAGTATTACTATAACACCGCCGTCGAGTTTACAAATAATTTAATTGTTTGCTACAATTGTCTTGATAAATTGTTTATATTCATAGTAAAGTTTGGTCGGTTAGCTACATTGTTGACTGCTTTGGCTAGCTGCAGTTTGGCGCCGTTTTTATCAAGACAGTGACGTTACAAAAACACCATTTATTTTCATGTAAAGTTAACTTATTACAATTTATTTAAACCACGTTTAAATGCCTCGTGCTAATTTTGTTACCTAGAGGGTGAATT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
dmrt1ihb400/ihb400 (AB)Homozygous♀+/- ♂+/-5 figures from Lin et al., 2017Fig. 10 from Lin et al., 2017
dmrt1ihb400/+ (AB)Heterozygous♀+/- ♂+/-Fig. S4 from Lin et al., 2017
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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