Genomic Feature
ud1
- ID
- ZDB-ALT-180319-12
- Name
- ud1
- Synonyms
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- LeClair Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 9: 56259105 - 56259115 (GRCz11) (1) Details
- Nucleotide change
- CAGAGGGAGAT/TACCCC
- Variant Notes
-
The 9 bp sequence "ATCTCCCTC" was replaced by "GGGG".
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 6 bp inserted / 11 bp deleted in Exon 2 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
CTTAAACTGAAATAAACCTGTATAAAACCATATAAACACATGTGAATAAGCTAACATATGCAGGAAAATATCTGAAACAGACCAATCCTCTCTCTAAACTCTGTTTGTGCCGTCTAGTGGAAAATGAAGTGCTTTAGTGAGCTTTGGTGGCCTTCTAGTGTGACTGGAGGAGTGTTTATGACTGTTATGGTTCAGAATATGCGTTAGTTTAGTTCATTATATTCTCTCTGTCTCTCCTGCAAACTGTGAAGACGTCTCAGGAGGTCAAACTTGCTGCAATTATTGAAGTGAACAGAGGTAAATCAGCTGTATAGTAGTGCTGCTGATAATAATCATAATGAACAGAGTGTTGAAGAGTCATCTCTCTCTCTCTCTCTCAGACTGTGCGCTGTGAGCTGTGCGCTGACCTTGGCGAACTCGTCGAAGGTGATCTTCCCGTCCTGGTTGAGGTCCATGGTCCTGCTGATCTCCTGGATGATTTCTCGAACCCGGTACCCCGG
CAGAGGGAGAT/TACCCC TGGCGGCTTTAAACAGAGCGTTGAGCTCATCTGTGCTGATGTGACCGTTCCCATCCACATCTGCAGGACAAGGTCAAAGGTCAGGCCTCATATACACACTAATGACTTATTCTGTTAACTAAAATAAACTTTAATTTAATAAACAGAAATGAGTTGAATAGGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGCGCGTGTGTGTGTGTGTGTGTGTGCGTGCGCACATGTCTCTGTACTGACCGACTTTAGTGAAGGCCTCTCTGAGCTCCTCCATCTCCTCCGCTGAGATCTGTGCTGCTGCCATCTTCAACCCGCTATGATGATCACCTGATGACCAGAGGACTAGTTAGAGTCAGAACACTAGTTAACCGGAGTCAGGTCACTAATTAACCAGAGTCAGAGCACGTTGATCAGCAGGTGTGTGAGTGTGAGTGAGTCTGCGCTCCTCCTCTGTCCTGC - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None