Genomic Feature
ot100
- ID
- ZDB-ALT-180207-16
- Name
- ot100
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one insertion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Marc Ekker Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Insertion
- Variant Location
- Chr 10: 16027812 - 16027813 (GRCz11) (1) Details
- Nucleotide change
- -/CCGTT
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 5 bp inserted in Exon 1 (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation: at position 50 (1)
- Flanking Sequence
-
GTTATTGTAGTTAAAAATGTGGAGTTTAACCGGAGAAATGGGTGCTTGACAGGTGTCAAAAATTAAAAAGGGGTGCATACAGAAAAAAAGTTTGGAAACCACTGTGTTATATTACACCAAGTTCTTGATCTGGTGGATATTGAAGGTAGAATAAATGTTTCATTCACTTCTTTTAAAATCAATCTCTTGAGTTGATGTTTCATTTATGTTACAAATAACAGCCTGAACAGCCCGGCTCTTTTCAACCCTTTGAACCTCACAGGAGTTAATCTGTAGTAACCCAACTTCACAAACTTCAACCAATAGCCTTGACCACTGACACATTCCAGCTGCGATAACTTGCATGCATATGGGTTAGGTTTTCATGAATTGCCTGCCCACAAATTATTACTAGTGAATTTGAAAATGTATTTCAGGAAGAAAGAAGACTGGCTTGATTTTACTATATTTAGAGCAGGTCATGAATGTGAGATCCTCTTACCTCTCCCTGTCCTCCCCAAG
-/CCGTT AACCGTTGTAAACACCGTCATTGTCCTCTTTAAGTCCTAACTCTTTCAACCAGTTGTACTCTGGTTGGTTAATAAGCAGAGTCGACATATTCGGTGCTGCGGTTCGGACACTCGGCAACAGTTTATGCCTCTGAGTAAAAAGTCGCGCAAGTCTCAGCGTCAGCACGCGCTGCATCATGAACCGAGGAACAGTGGATAAGAGCTACACTCGTGTACGTCCGCGATCACGTGTATACGGGAATTCTTATTGGTCAAACTGCGACTCACCCCTTCAGCTTGAAAGCAGGTCCTTTTTTCTACTGCTGGTTGGATGCTAAAACTGCACCACCTAGTGGCAAATTCTTCCATAAATACATTGAAACCTAATTTTTTCTTTCTTTCTAATTTTATCAATTTTTGACTGCTTTTTTCCCGTTCCCGATGAATAACGTTATACATCATGCATTCGTTTAAATCACAGATCCACTAAAAAAAAATGCAAAAATAGAGAGATTAAGTTAA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None