Genomic Feature

ioz13

ID
ZDB-ALT-180118-1
Name
ioz13
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Liu Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 3170802 - 3170814 (GRCz11) (1) Details
Nucleotide change
TACTTTATGGATG/-
Variant Notes
the mutation disrupts the secondary structure of miR-142a as well as the  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
13 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
GTAAAAAGCTTACTCATGCCGATCAAAATGGCTGCCGTCTGATATACAGGAAGACGTTTGCGCTGTGCATGAAATGGCGCATTGCATATATTAAGGCTTTTGATTTTATTCAGTGCTGATTTACTTTTAGTTGATGCCTATTGCATAAACTTTGATGTAATTTAAACAAATCATGTGTGGCAATGCATTTGCTGTAAGCGTCTACATAACGCACACCACCGATTATTAATCATAAAGATGATTCACCCATCCATGCATGTCTTATGTTAAAAAATATAAATTCATTTTTTTTTTATAAAAAGCTGTGAGTTTGAAGTGTTTGTGTAGTTTGGGTGGGGTCCAGAAGTGTGTGTGTGTGTGTGTGTGTTTATGTGAAGGAGGAGTCCGAGATGTCTGCTTTTATCAGGAAGTCCAGAAACATCAGGACAAAAGGACGTACAGTGCAGTCATCCATAAAGTAGAAAGCACTACTAAACCCCTCGCCACAGTGTAGTGTTTCC
TACTTTATGGATG/- AGTGTACTGTTGGCTGCTGGGAACACTTCGTGACGACTGAAACCAAAGGAAAAGAGGAACTGGCTTTGTTTCGTAAAGTGGTGCACGTCTCATAGTGTCACAAAGCACATCCACGTGAGACGCGCACGCTTGGGGAAAATAAAGCCACGTTTCTTTCAACTGGCTATTCAGCGAGTGCATGCATGCTGTTCACACTTTAATAAAGCTTTCAAAATAAATCAAACGCATTTTTGTGTCTCATTTTTATGTGCACATGTTCTTTATTTATGTCCATATTACACTGTTCAAGTCGCATTTCAGGATGACATTTTAAGAAGATTCAATAGTGGCACTATAAGATGATTCAGTAGTCATGTTTAGAGATGATTTGGGAGTCTCATTTCAAGATGATTTTTTGATCACATTTTAAGAACCTCTAGTTGCATGAAAAAAAAGTTAAAAAGATAAAAAATTTTGTTTTGTGAAAATATATTTTATTTCTTTAAAAAGTCCATATTGCA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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