Genomic Feature

nub15

ID
ZDB-ALT-171003-2
Name
nub15
Synonyms
  • [d]O1-2 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Hibi Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 14
Variants
Variant Type
Small Deletion
Variant Location
Chr 14: 34492786 - 34492801 (GRCz11) (1) Details
Nucleotide change
TCAGTTCGCATGGGAC/-
Variant Notes
A deletion mutation (16 bp) was introduced in the ORF1 of wnt8a gene by a TALEN  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
16 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
TGTCGTCTGTCTCTTGTGCGTATCCATCTCAGTGTTTGTGCTTTGCATCTCAAGAAGAAGGGAGGATCGAGCAATCACTGGTCACTCACGCAGCAATGAACCCTTGCCAGATTTTTGCGTCGTTGGTTATGTCTATATGCTGTCACATACTGTCGTCAACAGCATGGTACAGTCATATTTCATATATTTTTATTTATTACTATTATTTTATTTATGACATTTTTAAATTTGACTTAACCCATGTTGACCTCATGCTTCCTTTTATTCTGTTTTTGCTACACGTAGGTCTGTGAATAACTTCCTGATGACAGGACCAAAGGTAATTACATTTTTTACACCTAAATTCTTGCAGAGCAATTTGTTATTTTATCTTTACATAAAAAATGTCTAAAACGTATACATGTCTAATCAAAGCTCATATTTTACATAAATCAGGCTTATCTCGCATACACCAGCAGTGTACAAGCTGGGGCTCAGAGTGGTATAGAAGAGTGCAAGCA
TCAGTTCGCATGGGAC/- AGGTGGAACTGCCCGGAAAGCGCACTGCAGTTATCGACGCATAAAGGCCTGCGGAGTGGTAAGTTAAATATTCGTCCTATCAAAAATAGACTTTAAATAAACATTTCTTTTAAGAGAAAGTTCTGGCTAGAATCTCAAAGCGTTTATCAAACTGAAAAAAAGTTTAGACTTTCAGTAGGTATACTGCTACAATTTTTTGAAAAGTTCATTGCGATGGTTAAATGATCCTGAAAAACTGTTTACATGTGTACTCCTAGCGGTCAAAACCAGACTACATAAATATTTTCAATCAAAGCCTAATATAAAATGACTGTATTTTTTTAAACGTAAAACTTTATACATACAATTTATTTAACAATTTACCATGCATGTGAAATAAAAAAAAAAAACAATTAGCCCTAATAAGAATGGGTGTTGTTAAAGTTTTAGAACAGTTTTTTATGTTTTGATACATTTTAAATGTTGACTACTGTATATCTATTCTCCAAATGTGTTTATTA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
wnt8anub15/nub15 (AB)Homozygous♀+/- ♂+/-
wnt8anub15/+ (AB)Heterozygous♀+/- ♂+/-Fig. S3 from Hino et al., 2017
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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