Genomic Feature

oz23

ID
ZDB-ALT-170523-1
Name
oz23
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Amacher Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 11
Variants
Variant Type
Delins
Variant Location
Chr 11: 41244666 - 41244668 (GRCz11) (1) Details
Nucleotide change
AGA/T
Variant Notes
truncation in the Pax domain
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp inserted / 3 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AGAATAGTTTCAAAATCTTGATCACTTGATAAATGATATTAAATGATAGGATGTGATTAATCAAAGTGACAGCATGCAAATGTTTTAGTGACAGCCTGGGGAATTTTTAATTCTGGGAGATTCACAATTATATACACTTTACTGTATATTTTATGTTACGCTGCATGCGTACATCAAATGCGCAAGCTGTTTGTATTTTAAAAATAAAAATTGCACAGGTAAAACATATCACTTAAAGTGTCACAAGTTTTATTTTACTTCTATGTTTACGTATTTTAACTTACTTTTCGGGCCTGGATATTTTTGCACAGTCTCAACACCTCTGGGTCAAGGTCGAGTCAATCAACTCGGTGGAGTTTTCATCAACGGAAGGCCTCTGCCTAATCATATTCGACACAAAATAGTGGAAATGGCCCATCACGGTATCCGACCCTGTGTTATCTCCAGACAGCTGCGGGTCTCACACGGCTGCGTGTCCAAAATCCTCTGCAGGTACCAGG
AGA/T CCGGGTCTATCCGCCCGGGTGCTATTGGTGGAAGCAAACCGAGGGTGAGTGAACGATTTATACATGTTTAAAAATCATAATGGATTATACACAGAAAAAAATAATAATATTAAATTATATATGCCTTTCTTTAAATAATATAACTGAGTTTTTAAAAACGAAAAAACAACGCGCACTTATTTGTCTGTGTTTTTCTTTCTTTGTTCTCAACATTTGCGGTTCCAAACTAAAGCAAGTTGCAACACCCGACGTTGAAAAGAGAATTGAGGAATACAAACGTGAGAATCCAGGGATGTTCAGCTGGGAAATCCGGGATAAGTTGCTGAAGGACGGAGTGTGTGACAGAGGCACGGTTCCTTCAGGTGAGGCCTCTTCCGGTAAGCACAATTTCTTTATTATTGGCATACAGAGGACTGAAGGCACATTATCTTAACAATATAAAATTCCGTTTAATAATCTGTGAGAAAATGAGTAATTTTACACTTGAGAATTTAGCATGA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
pax7boz32/oz32; pax7aoz23/oz23ComplexFig. 9 with image from Berberoglu et al., 2017Fig. 9 with image from Berberoglu et al., 2017
pax7boz32/+; pax7aoz23/+ComplexFig. 9 with image from Berberoglu et al., 2017
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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