Genomic Feature
ct842
- ID
- ZDB-ALT-170522-11
- Name
- ct842
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Prober Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 6: 43919228 - 43919235 (GRCz11) (1) Details
- Nucleotide change
- GATCCACA/-
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 8 bp deleted from position 124 to 131 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
TTTTGGGTGAACTATCCTTTAAACCCCTGTTTCAGAACAAAGAAAATGATCTACAGGCACAGAAATGCCATTTAAAATGACATAATACACCTTATAATCTAAATAATAACCATAAATTAGCATCATATGACCTCTTTAAATAAATTCAATAAATTACTCTAAACTCCCTTTTACAGCTATACATACACTTTATACAAACATTAGGATGCTACATAGCCGTACACACACATCTTCATCAGAGGTATTGATCCTGGAATGGAAATGGTGGGAGGCATTTGGACTTGCCATCAGCTGTAGTGATGCATGCCAAGTTGGGTAAGCAGGGGCACGTGTGATGGAGTCTCTTTCCAAAGAAGGGTACCTAAATATGAATGACCGATTAAAAACAAGTAGATCATAACGAACCAAATCAAAGATAGGAGAGAAAAGAAAACCTTGTGGCTCATTGGATGACAGTCTTCTCCCTCCTGACCCATTGGGATGCACATTCGGAGACTGCG
GATCCACA/- GACTGACTGCACAACACATGCCACCTCCGCACTGAGAGTCCTTCTCACATGCCTGCAAACACACATGCACTCATTATAAACACATCAACATGTCCACTTTTTGACTCTAGTGAGGAAACAGCAGGGATGGAGTGTTCGGTGTGTCCACTTGATGCAGTAAAACAGCATTATAAAGTTATGTATAGTGGGTAGGAGCCCAAAGGTGGCATCGAATTTTCTCTGGTGGATCCAGGGTACTGATTTGCCCTGACAGAGCGTGTAGGATGATGGTCTCAGTGTGTTGGAAAATGCCATGCCTCCGTCTCCATTAGGCCTGGGGTGTTCTGACAGCACTCGCGCATATTTTGGGAGTGCTGTAGGCTTTACTGTCCTGACAGGTGTGGAGGAAATGCATCTGAGCATCCCAACACATTCATGTCAAACAGCACTGCAATTTCTGCTGACCCTAGAAACGCTCTGTGAGTTTTCAGCTTTACTAAGGAATTATTTTATGCATGTAC - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None