Genomic Feature

sny593

ID
ZDB-ALT-170126-13
Name
sny593
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Amack Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 13: 38087765 - 38088357 (GRCz11) (1) Details
Nucleotide change
CATGTGTACGGTGGAAGATCTGTGTAGGCACTTCCCTCACTCAGGCAGGTGCCTCCATTTAAGCATGGCTGCTCATAGCATCCGTCAACGTTCTCGCAGTAACGTCCTGAAAAGTGTTTGTGACACCGACAGGTAAATGAATCATCTTTAAGCGTAGTTCTGCATTCTCCTTTTCCCGAACACAGCCGAAGGAGAGGTGAGCTCTGGCAGAGCTGAGGCTTGACCAGAACTGCAATGCGTAGGCCAAACCTGCACAGATGACTACTCCCTCTATTAATGATCGTAAAGTAATTCAAACCAGACATCAGCCACTTTGATTCCACTTGCAAAGTACCATTTATACTGCTGGCAAATACCAACTGCTCCTTTCGGGGCTCTAAAATCGCGCACTTATCAAACTCCTCTTTAGAAACCTTGATTAGTTGGACACCGTGTTGTTCAAGCGTTCCGTCGGCAGAAACAAACAAGAGGTCTCCAAGTTGAAGTTCCAAAGGGCAAAGTTGAGGAAAGTGATATGGCCCAGTTGTCCAGAAGTGTCCATTTGTTTCTGCAAAGCTGCTCCAGCACTGGGTCAAACTGCTGCAGGTGTTCTC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
593 bp deleted (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
None
Sequences
Flanking Sequence
TATCAACTAAGTACTACTTTGGATTTCGATAATGGATTAGTAAATTTAACTATGGTTAATACACGTTGTAGTGGTTCAGTTAATTTTTAGTTCATAACAGCAGATACATGAACAAACATTAACCAATGTGTGCTGTTGGACATGTTTTCATCCACTTTGAGGTGATTTTGAGTCTTAATTTGGCCACAACTTTCTCTGTGTTTCAGAAAATTGAATGGATTTTTGATATTTTGGGAAAATGCTTAAGGGGACAAATTTACTCCCCTTTCATTATGTTTATGGCTTTTTTTTTCTCCATTAACGTCAATGACATTTTTTAATCGCAAAGCTATGACACCATATAATGATACATTCTTGAAAGGTATTTAAATTCTTACTGTCCATCACCAGTTGCACTCCTGTAACTCCATGTTTTGCCCCATGTTATGAATTCACTCGAATCTTCACTTCAAACTAAATTAAACTAAAGTTCCTTACCTGTGAATGGAGCAGGACAAAGA
CATGTGTACGGTGGAAGATCTGTGTAGGCACTTCCCTCACTCAGGCAGGTGCCTCCATTTAAGCATGGCTGCTCATAGCATCCGTCAACGTTCTCGCAGTAACGTCCTGAAAAGTGTTTGTGACACCGACAGGTAAATGAATCATCTTTAAGCGTAGTTCTGCATTCTCCTTTTCCCGAACACAGCCGAAGGAGAGGTGAGCTCTGGCAGAGCTGAGGCTTGACCAGAACTGCAATGCGTAGGCCAAACCTGCACAGATGACTACTCCCTCTATTAATGATCGTAAAGTAATTCAAACCAGACATCAGCCACTTTGATTCCACTTGCAAAGTACCATTTATACTGCTGGCAAATACCAACTGCTCCTTTCGGGGCTCTAAAATCGCGCACTTATCAAACTCCTCTTTAGAAACCTTGATTAGTTGGACACCGTGTTGTTCAAGCGTTCCGTCGGCAGAAACAAACAAGAGGTCTCCAAGTTGAAGTTCCAAAGGGCAAAGTTGAGGAAAGTGATATGGCCCAGTTGTCCAGAAGTGTCCATTTGTTTCTGCAAAGCTGCTCCAGCACTGGGTCAAACTGCTGCAGGTGTTCTC/- CATGAGGGTCCACCTCACGCTGATGTTCTTTGGCTGAGTGTGCCATTCACGAGACGTGGCTCTGCGGCAGGTTACCTGGC  ...
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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