Genomic Feature

oz7

ID
ZDB-ALT-161010-12
Name
oz7
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Amacher Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 16
Variants
Variant Type
Small Deletion
Variant Location
Chr 16: 28384485 - 28384489 (GRCz11) (1) Details
Nucleotide change
GCGAA/-
Variant Notes
Frameshift after amino acid 79.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
None
Sequences
Flanking Sequence
TTTTGCGAAGCTGCAGCTTTTAACCTGGATTTAGAAAAGCCCACGGTTTACAATGGACCTGAGGGAAGTTATTTTGGATACTCACTGGACTTTTACCACCCAACACAGGATAGAAACGTGTAAGTGGCAATTTCAGTGAATTATTTAGCTGTTTTGTTTGATAAAAAGTTTTCAAAGAGAAGTATCTTCCAGTAGCCCAAGTGTAGAAATAACCATAACTCAGTCTTGGTTTGGTTTATGCCAAACAATATTTAAGAGTATTCTTCGCAGCTTTTTTATGCAAAAACACTTTCAGCACCACCAATATGGACCAACACAATTCTGAAGTTGATTTTTGAGGGAATTTAATTAGAATGCTGACATAAAATAGATAAACATAAATTTTAAGAACAGTTGAGATATTTTCTCACTTGTAAATGCTTTGATCCAGTAGGATGCCGTTGTGTGTAGATTTATGCCTTTCTCTCTCCAGCATGTCGGTGTTGGTTGGGGCTCCTAAA
GCGAA/- CACCTCTCAGCCGGGGATTGTGGAGGGAGGAGCGGTGTACTACTGCCCCTGGCCGGCATCAGACCCAGACTCCTGCCGCCAGATCCCCTTTGATAAAGCAAGTAGGTACCCTCATGATTTATTACCCATGGTTCATGCAAAAGGTCCAGGTCCCACTGACGCAATTAGCCCCCTTCATTGAGAACGAGTACTTTTTATCGTTGTAATTACTAAATTAATTTAATTCCAGTTTTTCAATTAAATCTTATTCGCAAACAGACATCAGGCTATATATAGGCTACTTTTTATTTCTGAAATCTGCTTACACAGATATTTCCTTTCCCATGCTTCATCTTCAGACTCGGCTGCATAAATTCCTCTTCCTCCAATAAAAAGATCAAAAACCACATCCAAGAAAGAGTTAATTTCGCCGCATATGGTTTGGTTTAAAATTTCAGGAGCGGAGTAATTACCAGAGAAAGGCGCGTAACTTTACCTCAGCGCGTAATCTGCCGTAATTT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
itga8oz7/oz7 (AB)Homozygous♀+/- ♂+/-Table 1 from Talbot et al., 2016
itga8oz6/+; itga8oz7/+ (AB)ComplexTable 1 from Talbot et al., 2016
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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