Genomic Feature

u801

ID
ZDB-ALT-160805-4
Name
u801
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Steve Wilson Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 16372506 - 16372507 (GRCz11) (1) Details
Nucleotide change
GG/-
Variant Notes
A zebrafish mutant line that carries a slc39a14 null mutation (slc39a14 U801)  ...
Despite abnormal Mn levels, slc39a14 u801 mutants survived into adulthood  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp deleted from position 673 to 674 in RefSeq:NM_001326699.1 in Exon 5 (1)
Transcript Consequence
None
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTGTGTAAATACCTGTTTTACATTGTAATTATGATTGATTAAAAAATTTAAAATGTAAATTAATGTGCGATTAATTTCTGTAATTGCATCTTTAATTACATCCTACACCTTAACCCACACTTACTTTTTCCACGTCCTACTGAAAGTTCACCTTTTTTTAAAGCATATTACAAATGAATAGTGCAGCTGCCCCAAGGAAATAAAAGACAAATAGCACATACTGTTCACACATTCCAGCACGAAACATAAAAAATGACCTCCTTTTGTGTGTGCTGTCAGCTGAGGCCTGTTTAGATGTCACTGGGAACCCGTGTCACAATGACAATGTCAGATAAAGGTATTTGCTATAACAACCATAGTAGTTTACCGGAACAGACCATCAGTTCAAACCTCACCGTGTCTTTTGGCTTCAAGATCATCTTCAGGATTTTCTCTGTAAAGAAGAACAGGTAGAATCCTCCAAACACGACTGCGGACTTGGGCACATAATAATCCTCCAT
GG/- GGTCAAACCCGAAGGCCTACATACAGGGAAAAAAAAAATTTGTGATTTCAAATAAAGCTTTTAATTTTAAAGAAAAAATAATATAGCATTGTAATTAAGGTCAAATTAAGAAATAATGTTTTTATTATTATGAAATATATTACAACATTTAATATAAATGGTGAATTACATTACTGTTCAGATGTTTGGGGTTTTGTTTGAAGAAATTAGTACTTTTATTTAGCACACAAAAGTTAGTTCACCCAAAAAAGATTTTTTCCCCCCTTTTACTCTCCTTCAAGTGGTCCCAAACCATTATGAGCATTATATGTGTGTGTGTGTGTATGTATATGTATATACACACACACACACACATTTTTATTTTTTAAATGTTGGAAAACCTGTAACTATTGACTTTCATAGTAGGAAAAACAAAAACTATGGAGGTCAACGGTTACAGGTTTTCAGCCTTTTTTAAATCTTCTTTTGTGTTCAGCAGAAGAAATTAAAATATGATAAAA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations