Genomic Feature

f172jy

ID
ZDB-ALT-151111-2
Name
f172jy
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Yeh Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 13: 8407441 - 8407450 (GRCz11) (1) Details
Nucleotide change
CTGCATCTGT/-
Variant Notes
Metelo et al (2015): 10-bp deletion in exon 3, resulting in a frameshift  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted in Exon 3 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
None
Sequences
Flanking Sequence
GCATTATGATTGGTTCTTGATTCGTTTTGTGAGATTTACACTCCTTATAATTTTTTTTTTTAATCTGATAACAAATGTATAACTGGGAATGGTCATACAAAACAGCAGCCATGTGTAAGGAAGCAATTCCCAGGCAGGAGATAAGTCCAAAAGCTTTGACAAGGGTACAAAAAAAGTGACACATCCTTCCTCCTATACAGTACTTAAAGGAAACGGGCTTGTGCTGTGGTTAATAATGGCATCTTGTAAGCCTGTGATTAAGTGAACCCGAAGGAAATGGACGCTAAACAGACAAACAGCTAATTATAACAGCACTAATGTGAGTATCTGTCTGGACTGCGATTCGATTCATGTGTTGATACAGTGTGCGTTACTACTCACCTGAGTGAGACCCATGAATTTGTTGATGTTCTCCGATAAGAAGATCATGTCTCCATCTGATGTTACCACTGTAATAAAGCCACCGAGTGACTTCAGATACCAACTGTCCATGAGTCTGT
CTGCATCTGT/- CATTTCAGTGGGAGTATTGTAGCCTGCAATACAGCACAAACACAAGAGTTTTAGAATGCAAGTTAGTGTGTGTGCACACTATACTAGTCTTGTTCTAGCTCTCAAGCCCTTGGCTCACATCCAAAATAAACAACAGCAACTTCATCCTGCTACTCTGAACCCTCCTAACAACAGTGACCTCTGTTTTGTCACTGCCCTTAGCTCCACACAAATATTAATACAGGCCACAAATACTGACTCACAGAAACTGCCTTCAATTTAAATAACTCACAGTACAATGCAGAGTTTTTAAAATAGTATTTTATTGTAAAATAAAGATAAAACCTAGCAAAAATGGGTAAAATGGGCAAAAACTCTAAACTAGACAAACCACAAAGTCTGTGAAAGTAATTTTTGCCTCTTTATATAGTGTACAGTTCCACAATGCAAGTGAATTTAGTTAAAGGGGTGCATTTTTTTTGTAGACAGATATTAGTGCCTTTTTACAAATTCTGTTGGCA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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