Genomic Feature

sl23

ID
ZDB-ALT-151106-1
Name
sl23
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
ENU 
Lab of Origin
Voigt Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 20: 38822696 - 38822715 (GRCz11) (1) Details
Nucleotide change
TCACTGTGCCCTCTGGATTA/-
Variant Notes
Cox et al (2014): a 20 bp deletion in exon 5 of the carbamoyl-phosphate  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
20 bp deleted from position 510 to 528 in Exon 5 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TGACTTACTTCATTTTGTATGTCTTTGCGCCAATGACCAAAGACAGCAGCTGATGGCCCAAGCAAATTCCAAAGATAGGTTTGGGATTCTCCACACATGCCACTTTGCGTATATTCTCTACAGTCTCCTTACAGTACTCAGGATTGCCAGGACCGTTGCTGATAAACAACCCATCAAAGTCTAGAAAAAACAGAGGCAACATGCCCAGTGATAACATTTTCAATATGCATTTACTAGGGGAGTGAAATATTGATACAAATTATTACTTATCAATTTATGTAATCATTTTTGGGGATTCACAAAGTTTACACACAATACACCAGTTGTTTATACATTCATTTCATTTGCCATTTTCCCAGAAGACAACCCTCAACAATAGTGTTATTGTTTACCATTGCTGTCCAGAGGTTGATCCCAGGGGACAACAGTGACCCGGGCGCCTCTCTGGCACAAGCAACGTATCTGGTTGTACTTGATGCCACAGTCTATAGCAGTGATTC
TCACTGTGCCCTCTGGATTA/- AACACTTTTGGTGCCTGTTGAATGGGCAATACAGAACACAAAAAATAAATTTCACTGCATTACACAACATCATCCATCTAAAAAACACTGAAGCTAGACACCTACTTTCATGGAAACTTCTTTAACAAGGTTTCGGGCATCTGGATTGTCAAACGGAATATTGTCGGCTGGAGTTCCTTCCACCACAAGTTTTCCCAACATGGTTCCCTTCTCTCTGATCTTTTTGGTCAAGCATCGAGTGTCAACACCTGATTTTCACAGGATAAATTATGTTTTAGTTTTTTGAACCATAGTACAATGGGATTAAAATTCTTGCTTTTACTTTGTATGAATAAAAGCAAATATTTGTCAAGCAAGAGTAGTAGTGCTGTTTGTTTATTGCTATACAAGATTTATCGGATAGCAGATACAGTTGCAGTCAGAATTATTAGCCCTCCTTAATTATTAGCCCCCCTGCATATTTTCCCCCCAATTTCTGTTTAGAGGAAATAAGATTTTTT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations