Genomic Feature

uw8

ID
ZDB-ALT-141007-4
Name
uw8
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Halloran Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 23: 29630691 - 29630700 (GRCz11) (1) Details
Nucleotide change
GTCGTTTTCT/-
Variant Notes
Allele clstn1 uw8 has a 10 nucleotide deletion that would result in a frame  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTATTTAAAGTAATAAAGTTTAATATTATTATTATTATTATTATTATTATTTGTGATAATATCACTGTTGCAAAGAAGACAGTCTCAGAAAATAAATAACTTAATTTTTTTATTCTCATTTTAAGATATTACCAGTTTTGAAAAAATATAATAAATCATATAAATAGTAATCGAAGGCACAAAATATAACTGTCTGCTTTTATTTATTTATTTATTTGTTAGTTTCTTCGGTTGTTTGTTTTAAATCTTGACAGTTACAATACAAACAATATGAACCTACAAGACATTCGTTATCAAAATAATTAACTAAATAAAAATCTCATGAAAAAAACAACACCACAACTTTCATTGATTTATGTGAATACCCCTTTAAGTTTCAGAAAGCATGAGGAAGCAAAATGGCTGCCATTCGAGACCAGAAGATGGAGGATCTTACCTGCGTAGCGCAAAGGAGCATCTTTATCCAAGGCTATCAGAGGAGGGTCCAGCAGAACTTTGTC
GTCGTTTTCT/- GTCACGATACCATGATACGTGGTCTCAATCCACGGCTTGTGCTTATTTACTGTGAAGGTGAAAAAAAAAACAAGACAGAGAGAACTTTTGTTTAGACGCCAAATAAAACCAAGGCCAGACAACAACCAATTATTTTGTATTTCTCTGAGGATGCACTATGTGTCAGCACAACCGTCCGCCAGCTTAAAGGCAGAATCGCAGGCTGGCGTAACACAGCGGTGGTGAGTGTGTGTGTGGTGGCATTTACTTCTCTCAGCAGCTCATTAGTGTTGACTGAAGGCTTTGAGCTCTGAAAGTGGAGAGGACAGATGTGCTGCACAATCACTGCAGCTAGTTTAACCCGGTTTACTCAAGATAATTGACAAGGGAATAGGAAAGCTGTGTCATACAATCGTTACTACATTATTAAAACAAGAGTCCAGAAGAAAATGGCTCAAAATAATGAAAACACTTGTGAAACACCCCAATACCCTTATCTATCAATTAAAGCTAGCTTTTTC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations