Genomic Feature

fr24

ID
ZDB-ALT-131218-1
Name
fr24
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
Lab of Origin
Hammerschmidt Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Point Mutation
Variant Location
Chr 20: 37437785 (GRCz11) (1) Details
Nucleotide change
T/A
Variant Notes
In fr24, a T→A transversion at position 1388 resulted in a nonsense mutation at  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
T>A at position 1388 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation: Leu>Stop at position 463 (1)
Sequences
Flanking Sequence
ACTTTTACCATTTGAGTTTTTAGTCTTCAGCTTATCACTGTTCTCTCAAGGATCACAACCACACGGTAAAACATTTCAGACTGCTTATTTATATTTTTATTAAAAAGATATTCCATTAGGCTAATTGGTAACACTTTATTTAATTGGTCCAGTTGAGTGTTAGACTGTCTGCTTAATATCTGTTGATACTGCTCCTTCAACAGATGTTTAACTGACTATAAGAAACTTTGCAAGTACACGTCAGCTTACACTAACCCTTATCCCTAACCCCAACCCCAACCTGACAGTCTACTTGTAATCTAATGAGAATTCGTTGGCATGTTAAACTCAACAACTTAATTTCAACAATTTAAGCTGGCAACTTAAATTCAGCAAATGGACCATCAAAATAAAGTGTTACTGCCTATTTATATGCATATATATATATATTTTTTTTTTGCTAATCTATCGAAACAGATTTGTTGTTGATGTGATATTGCATTTTTCACAGACAAATCTAC
T/A TGGCGCTACTGGTGTATAAGAATACCACCGATGTGAATCTGGCAGAGGTGGAGATTGAGAGCATGCTGAGAAGTGCCCCTGCTATTGGAAATGGCTTGACTTTAGACAGTGTTACCGTGAACTTAATGGGTATGGCATGCTTTACAGTGACAATTCAGTAACCATAAATAATGAGTATTTTTGCTTGGATATTGTTTAATAACGTGATATTTTTAGTGTTTTAATTAATATGAATTAATACAAATTAATATTACTGAGCTCTTCTTAAATATAGGTAATGTTGTATTTGTCTTGATACCTATAAGTGCATTTTGAAGTCATTAAAGATGAGATATACAGTGCTCAGCATAATTGAGCTATGCTCATAATTGAGTTATGCATTTCTCTTTTTTGAAAATGCATATTTTTATCCATTCCTCAGTGAATATAGGCAATAGATTGTAGTGAATTTAAACAAAACAGATTTGTAAAACAGATGTTGATTAAAATGTTATTTTAGT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations