Genomic Feature

hu3625

ID
ZDB-ALT-100412-1
Name
hu3625
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
adult males treated with ENU
Lab of Origin
Hubrecht Institute
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
Comment Citation
otx2b hu3625 fish carry an A to C point mutation in the essential splice  ... Bando et al., 2020
Homozygous mutants die between 11 and 12 dpf. Bando et al., 2020
Genome Browser
Genome Build: GRCz11Chromosome: 17
Variants
Variant Type
Point Mutation
Variant Location
Chr 17: 44246366 (GRCz11) (1) Details
Nucleotide change
T/G
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
A>C (1)
Transcript Consequence
Splice Site (1)
Protein Consequence
None
Sequences
Flanking Sequence
AGCCGAGCCCCGAGGCACCGTAACCTTGTGTGGGGAGGGACGCGGGGGACTGATTTAGGTGACTGGTGACAGCGTTGCTGCTCATGGGGCTCAAAGTGGATCCCGGCCCGGTCAGCTGATGGTGCATGGGCGTCAAGTATGAGCCGCAGTCCATACCCCCAAAGTAGGAAGTGGAACCAGCATAGCCCTGGCTATATCCAGACGCTTGAGTGTAGGTCATGGGGTAGGATCTTTGCATGCAGGAGGAGGAGGTAGAAAGTGGGTCTGACAGCGGCGAGATAGAGGCTGGGCTCCAAATAGACACCGGAGCGGTTGTGGTAGAGATGGCCGGGACTGAAGTGCTGGAGGGCGGGGTGAACTGGCCACTCGCCCCGCTCTCAGAACTGGCCTCCCGCGCTGGAGAGCTCTTCTTTTTGGCAGGTCGCACCTTGTTCTGGCCTCCGTTTTGTTGTTGTTGCTGCTGTTGGCGACACTTTGCCCTTCGGTTTTTGAACCAAACC
T/G GATGTGTTGAAAAAAAGGGGTTTTTATTATTTACGACGTGAACTAACGGCAGCACTATGGTCTTTATATATGCTCTGTTTGGTCTTCGCTCAAAATAAAACAAATGTGATATTGATAATATTTTAGTGCATCGCTCAGTTCATATAGATACAATACTTTTATTATTATTATAATTATTTAACTTTCTCATGAGTTGAAAGATGCGTACCTGTACACGGGACTCCGGCAAGTTGATTTTCAAGGCCACCTCCTCGCGCATGAAAATATCCGGGTAGCGTGTTTTCGCGAATAAAGCCTCCAGCACATCTAGTTGCGCTCTAGTAAATGTTGTCCTTTCTCGTCTCTGCTTTCGAGGAGTCGCTGTTTTAAATAAACAAAAGCATCACAGGTTGTCATTTAATAAAAAACGTCCATGCTTAGATTTAATTATTAAATGTAAAAAATACTATAAATATTACACATTAACATATCTGAATCGGCACAGTACAACATGTTATACA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
otx2bhu3625/hu3625 (AB)Homozygous♀+/- ♂+/-4 figures from Bando et al., 20203 figures from Bando et al., 2020
otx2bhu3625/hu3625 (TL)Homozygous♀+/- ♂+/-text only from Busch-Nentwich et al., 2012
otx2bhu3625/+ (AB)HeterozygousUnknown
otx2bhu3625/+ (AB)Heterozygous♀+/- ♂+/-3 figures from Bando et al., 20203 figures from Bando et al., 2020
otx2bhu3625UnknownUnknown
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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