Genomic Feature
j4e1
- ID
- ZDB-ALT-001205-14
- Name
- j4e1
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation (1)
- Protocol
- ENU
- Lab of Origin
- Stephen L. Johnson Lab
- Current Source
-
China Zebrafish Resource Center (CZRC)
(
order this
)
European Zebrafish Resource Center (EZRC) ( order this )
Zebrafish International Resource Center (ZIRC) ( order this ) - Other Pages
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 14: 3162473 (GRCz11) (1) Details
- Nucleotide change
- C/T
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- G>A at position 1949 in GenBank:AF240639 (1)
- Transcript Consequence
- Missense (1)
- Protein Consequence
- Amino Acid Substitution: Val>Met at position 614 (1)
- Flanking Sequence
-
CAAAAATTTAGCCCTGGCACTGTTGCCACACCAGCCCACATTACCACACCGACACAGCCCCACCCACAGACACGCACATTCACTATTTATTTTGGTGTAAAGATGGTGAAATAATATGACATTCTTGCCAGATTTTGATTATGTCCGGGTAACCTTGGATTGGGTCGGCCCAACTTAAAACCAGGCGGCAGTTTCATTTATTAACATTTATTATTATTATTTTTATTCTCATCATCATAATATCACATCTAGCAAGAGATAAAAGGTGTCTGCACTTAAAAACAATACATATTAAAAAAAAAAAAACTGACCGGCCCACATTTATAAATTGGTCCGGCCCTTCTGGCATTTGCCAGAATTGCCAGATGGCCAGTCCTCCCCTGGAGCAAACCTTGCAGAGCTGTGGCCCTTCAGGAATTGAGTTTGAGATCTACAGTATATACAGTACAATGCTCTTTATAGTAGATATGTTTTCTGACCTTTGAGCATTTTCACAGCCA
C/T TCGTGTGATGTTGTCCTCTTTGCCCAGACCGTAAGCTGTGGCCTCCACCACCTTCCCAAACGCACCAGCACCAAGAGTCTTCCCTACACACACACACACACACGCACACATCAGCGTTAAAGGTCCCATGAAGTGCTTTGAAATTCATATTCGAAATTTGCCTTAATCTCAACTGTAACATGAAGAGAGGGCGGAGCATAGCGCAGCCCCTCCCCTTTAAAAATGAGCCAATAGTGTGTTGTTTTTAGGACAGCTCTGCCAGTGAGAGTGTCGAGCTCAAGTGCATCAAATGAAAAGCAAACGAGAAGTGTCTTGAGGGGGGAGGGGCATGTCAGATACTAAAGAGCATCCCTGCTGAAAAATCCAGCTTAAACCAGCCTAGGCTGGTTGGCTGGTTTTAGCTGGTTGACCAGCCTGGTTTTAGAGGGGTTTTGGCCATTTCCAGGCTGGTTTCCAGCCATTTCCAGCCTGGTCTTAGCTGGTCAGGCTGGAAAATGACC - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None
- Rutherford, H.A., Candeias, D., Duncan, C.J.A., Renshaw, S.A., Hamilton, N. (2024) Macrophage transplantation rescues RNASET2-deficient leukodystrophy by replacing deficient microglia in a zebrafish model. Proceedings of the National Academy of Sciences of the United States of America. 121:e2321496121e2321496121
- Bravo, P., Liu, Y., Draper, B.W., Marlow, F.L. (2023) Macrophage activation drives ovarian failure and masculinization in zebrafish. Science advances. 9:eadg7488eadg7488
- Chiang, H.J., Koo, D.E.S., Kitano, M., Burkitt, S., Unruh, J.R., Zavaleta, C., Trinh, L.A., Fraser, S.E., Cutrale, F. (2023) HyU: Hybrid Unmixing for longitudinal in vivo imaging of low signal-to-noise fluorescence. Nature Methods. 20(2):248-258
- Djannatian, M., Radha, S., Weikert, U., Safaiyan, S., Wrede, C., Deichsel, C., Kislinger, G., Rhomberg, A., Ruhwedel, T., Campbell, D.S., van Ham, T., Schmid, B., Hegermann, J., Möbius, W., Schifferer, M., Simons, M. (2023) Myelination generates aberrant ultrastructure that is resolved by microglia. The Journal of cell biology. 222(3):
- Palsamy, K., Chen, J.Y., Skaggs, K., Qadeer, Y., Connors, M., Cutler, N., Richmond, J., Kommidi, V., Poles, A., Affrunti, D., Powell, C., Goldman, D., Parent, J.M. (2023) Microglial depletion after brain injury prolongs inflammation and impairs brain repair, adult neurogenesis and pro-regenerative signaling. Glia. 71(11):2642-2663
- Berdowski, W.M., van der Linde, H.C., Breur, M., Oosterhof, N., Beerepoot, S., Sanderson, L., Wijnands, L.I., de Jong, P., Tsai-Meu-Chong, E., de Valk, W., de Witte, M., van IJcken, W.F.J., Demmers, J., van der Knaap, M.S., Bugiani, M., Wolf, N.I., van Ham, T.J. (2022) Dominant-acting CSF1R variants cause microglial depletion and altered astrocytic phenotype in zebrafish and adult-onset leukodystrophy. Acta Neuropathologica. 144(2):211-239
- Dai, Y., Wu, S., Cao, C., Xue, R., Luo, X., Wen, Z., Xu, J. (2022) Csf1rb regulates definitive hematopoiesis in zebrafish. Development (Cambridge, England). 149(16)
- Ethiraj, L.P., Fong, E.L.S., Liu, R., Chan, M., Winkler, C., Carney, T.J. (2022) Colorimetric and fluorescent TRAP assays for visualising and quantifying fish osteoclast activity. European journal of histochemistry : EJH. 66(2)
- Hason, M., Mikulasova, T., Machonova, O., Pombinho, A.R., van Ham, T.J., Irion, U., Nüsslein-Volhard, C., Bartunek, P., Svoboda, O. (2022) M-CSFR/CSF1R signaling regulates myeloid fates in zebrafish via distinct action of its receptors and ligands. Blood advances. 6(5):1474-1488
- Iwasaki, M., Kawakami, K., Wada, H. (2022) Remodeling of the hyomandibular skeleton and facial nerve positioning during embryonic and postembryonic development of teleost fish. Developmental Biology. 489:134-145
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