Transcript

csnk1a1-205

ID

ZDB-TSCRIPT-160112-167

Name

csnk1a1-205 Nomenclature History

Previous Names

csnk1a1-005

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

csnk1a1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000173181 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000173181.2|gene_biotype:protein_coding|ENSDARG00000052674.7 transcript_biotype:nonsense_mediated_decay gene_symbol:csnk1a1 cdna chromosome:GRCz11:14:38770630:38782985:-1
CAAATGGAGAGGAGGTAGCTGTGAAATTGGAATCACAGAA
AGCCAGACATCCTCAACTCCTATATGAAAGCAAATTGTAC
AAAATTCTCCAGGGAGGAGTCGGGATCCCACACATCAGAA
AATGGCGGATGAGAGAAAACAAGTTTCAGGGCCTAGCGAG
TCTGCTGCTGTCTTCTCAAGGTGGTATGGCCAAGAAAAGG
ACTATAATGTCCTAGTCATGGACCTGCTCGGCCCAAGTCT
GGAAGATCTCTTTAACTTCTGTTCGCGCAGATTCACAATG
AAAACTGTCCTAATGCTTGCAGATCAGATGATCAGCAGAA
TCGAGTATGTGCACACAAAAAACTTCATCCACAGAGATAT
CAAGCCAGACAACTTTTTAATGGGTATTGGCCGTCACTGT
AATAAGTTGTTCCTCATCGATTTTGGTCTGGCCAAGAAAT
ACAGAGACAACAGGACACGACAGCACATACCCTACAGAGA
AGACAAAAACCTCACAGGCACAGCTCGCTATGCCAGCATC
AACGCACACTTGGGCATCGAGCAGAGTCGTCGAGATGACA
TGGAGTCGCTAGGATATGTCCTGATGTACTTCAACAGAAC
CAGCCTGCCTTGGCAGGGACTGAAGGCTGCCACAAAGAAA
CAGAAATATGAGAAGATTAGTGAGAAAAAGATGTCGACCC
CTGTTGAGGTGTTGTGTAAGGGTTTCCCAGCAGAGTTTGC
CATGTACCTGAACTACTGTCGTGGGTTGCGGTTTGAAGAG
GCGCCTGACTACATGTACCTGCGTCAGCTTTTCCGCATTC
TTTTCAGGACTCTGAACCACCAGTATGACTACACATTTGA
CTGGACCATGCTGAAGCAGAAAGCAGCACAGCAAGC

OTTDART00000062775 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000062775|OTTDARG00000043319| csnk1a1|OTTDARP00000049072 csnk1a1-005 LG_ BX088707.15 Danio rerio protein_coding KNOWN, 876 bp
CAAATGGAGAGGAGGTAGCTGTGAAATTGGAATCACAGAA
AGCCAGACATCCTCAACTCCTATATGAAAGCAAATTGTAC
AAAATTCTCCAGGGAGGAGTCGGGATCCCACACATCAGAA
AATGGCGGATGAGAGAAAACAAGTTTCAGGGCCTAGCGAG
TCTGCTGCTGTCTTCTCAAGGTGGTATGGCCAAGAAAAGG
ACTATAATGTCCTAGTCATGGACCTGCTCGGCCCAAGTCT
GGAAGATCTCTTTAACTTCTGTTCGCGCAGATTCACAATG
AAAACTGTCCTAATGCTTGCAGATCAGATGATCAGCAGAA
TCGAGTATGTGCACACAAAAAACTTCATCCACAGAGATAT
CAAGCCAGACAACTTTTTAATGGGTATTGGCCGTCACTGT
AATAAGTTGTTCCTCATCGATTTTGGTCTGGCCAAGAAAT
ACAGAGACAACAGGACACGACAGCACATACCCTACAGAGA
AGACAAAAACCTCACAGGCACAGCTCGCTATGCCAGCATC
AACGCACACTTGGGCATCGAGCAGAGTCGTCGAGATGACA
TGGAGTCGCTAGGATATGTCCTGATGTACTTCAACAGAAC
CAGCCTGCCTTGGCAGGGACTGAAGGCTGCCACAAAGAAA
CAGAAATATGAGAAGATTAGTGAGAAAAAGATGTCGACCC
CTGTTGAGGTGTTGTGTAAGGGTTTCCCAGCAGAGTTTGC
CATGTACCTGAACTACTGTCGTGGGTTGCGGTTTGAAGAG
GCGCCTGACTACATGTACCTGCGTCAGCTTTTCCGCATTC
TTTTCAGGACTCTGAACCACCAGTATGACTACACATTTGA
CTGGACCATGCTGAAGCAGAAAGCAGCACAGCAAGC

Related Transcripts

Transcripts related to csnk1a1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	csnk1a1-205	Ensembl	876 nt
mRNA	csnk1a1-201 (1) Ensembl	Ensembl	2,471 nt	Select Tool
mRNA	csnk1a1-202 (1) Ensembl	Ensembl	2,341 nt	Select Tool
mRNA	csnk1a1-203 (1) Ensembl	Ensembl	2,267 nt	Select Tool
mRNA	csnk1a1-206 (1) Ensembl	Ensembl	2,340 nt	Select Tool
ncRNA	csnk1a1-006 (1) Ensembl	Ensembl	734 nt	Select Tool
ncRNA	csnk1a1-007 (1) Ensembl	Ensembl	783 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations