Transcript

ottdart00000061452

ID

ZDB-TSCRIPT-141209-2187

Name

ottdart00000061452 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

dclk1a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000146943 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000146943.3|gene_biotype:protein_coding|ENSDARG00000018856.12 transcript_biotype:retained_intron gene_symbol:dclk1a cdna chromosome:GRCz11:10:34767856:34772211:-1
ATTCACCGGAATCCGCGCTCCGCGAGTGCTGCTGCTTCTG
CCATCTGGAATAGCACTGTGTTTCAACATGCTGCAATACG
AAGTGAATGGGACCCCAGCGAGTCAGCTGTCCACACCCCA
TTCTCCAAAGTCACCTAGTCCATCTCCAGCCAGCCCGGGG
AGCTTAAAGAAACGCAGGGTAAGACGAGATTTTCTCTTTT
CTTTTCTTCTTGCACCTGCTGTTTTTCTGTTGCATTTGAA
ATCACCTATTCCAGTTTGGTTTTGTCTTCTTTTACATATG
GTGTGATTCTCCGCTTAGATAGCACATCCCTTTGCCCTCC
GCCACTATCTCAGACTCTATATTTAACGCGCTCCTTCTAT
GTTCTCAGGAAATGGACAAGGCCATCATTGACAGCTCAGC
TTAAACTTCCCCACTGGGCTAAGATCCACAGTCAGTGCTT
AGTCTGGGACGCCACTTTTGGAGACTTTTATGTGCTCTTT
CAATTTCATCATCAGAGTCCAATAGAGTTGTATATGGAGA
ATGAATCAAGACGTACTATTGAGGTTGGGTCCAAAATTCA
CTTTCGCTGTCAATCTGCTAGTGGTGAAAATTTGAGAAAG
TTGGCAATTATTGTTTCTTACCCGTCATAAAATTATTTTT
ACACTCTTAGTTTTTAGAAAAAATATTGATTTTTGTGCAT
TTATATTCGTGCAGATTTTTAGTGTTGTGGCAATATAAAT
TCTGTGGCATCCAAAAAAAAAAAGACTTGAAAGGGATAGT
TTGGTCAAGATGTTTGACTTTCTTTGTTCTTCATATTTGA
AAGAATGTTGAAAAGAGTTTGCCATTGTTGAATTTATTTT
TTAATACTATGGATATCAATGGATAATAAAAACAAAGTCT
TTAACCA

OTTDART00000061452 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000061452|OTTDARG00000027573|ZDB-GENE-061013-124 dclk1a|no_translation dclk1a-005 LG_none BX248233.7,FO681339.1,FO082026.8,FQ323105.17,FQ323123.4,CU571390.5 Danio rerio protein_coding KNOWN, 887 bp
ATTCACCGGAATCCGCGCTCCGCGAGTGCTGCTGCTTCTG
CCATCTGGAATAGCACTGTGTTTCAACATGCTGCAATACG
AAGTGAATGGGACCCCAGCGAGTCAGCTGTCCACACCCCA
TTCTCCAAAGTCACCTAGTCCATCTCCAGCCAGCCCGGGG
AGCTTAAAGAAACGCAGGGTAAGACGAGATTTTCTCTTTT
CTTTTCTTCTTGCACCTGCTGTTTTTCTGTTGCATTTGAA
ATCACCTATTCCAGTTTGGTTTTGTCTTCTTTTACATATG
GTGTGATTCTCCGCTTAGATAGCACATCCCTTTGCCCTCC
GCCACTATCTCAGACTCTATATTTAACGCGCTCCTTCTAT
GTTCTCAGGAAATGGACAAGGCCATCATTGACAGCTCAGC
TTAAACTTCCCCACTGGGCTAAGATCCACAGTCAGTGCTT
AGTCTGGGACGCCACTTTTGGAGACTTTTATGTGCTCTTT
CAATTTCATCATCAGAGTCCAATAGAGTTGTATATGGAGA
ATGAATCAAGACGTACTATTGAGGTTGGGTCCAAAATTCA
CTTTCGCTGTCAATCTGCTAGTGGTGAAAATTTGAGAAAG
TTGGCAATTATTGTTTCTTACCCGTCATAAAATTATTTTT
ACACTCTTAGTTTTTAGAAAAAATATTGATTTTTGTGCAT
TTATATTCGTGCAGATTTTTAGTGTTGTGGCAATATAAAT
TCTGTGGCATCCAAAAAAAAAAAGACTTGAAAGGGATAGT
TTGGTCAAGATGTTTGACTTTCTTTGTTCTTCATATTTGA
AAGAATGTTGAAAAGAGTTTGCCATTGTTGAATTTATTTT
TTAATACTATGGATATCAATGGATAATAAAAACAAAGTCT
TTAACCA

Related Transcripts

Transcripts related to dclk1a

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	dclk1a-201 (1) Ensembl	Ensembl	785 nt	Select Tool ZFIN BLAST
mRNA	dclk1a-202 (1) Ensembl	Ensembl	3,286 nt	Select Tool ZFIN BLAST
mRNA	dclk1a-203 (1) Ensembl	Ensembl	2,294 nt	Select Tool ZFIN BLAST
mRNA	dclk1a-204 (1) Ensembl	Ensembl	1,097 nt	Select Tool ZFIN BLAST
mRNA	dclk1a-206 (1) Ensembl	Ensembl	2,333 nt	Select Tool ZFIN BLAST
mRNA	dclk1a-207 (1) Ensembl	Ensembl	1,272 nt	Select Tool ZFIN BLAST
ncRNA	ottdart00000061452	Ensembl	887 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations