Transcript

sparcl1-202

ID

ZDB-TSCRIPT-141209-1492

Name

sparcl1-202 Nomenclature History

Previous Names

sparcl1-002

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

sparcl1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000168647 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000168647.2|gene_biotype:protein_coding|ENSDARG00000074989.5 transcript_biotype:protein_coding gene_symbol:sparcl1 cdna chromosome:GRCz11:1:37391195:37400053:1
GAGAGGTGCTTTGACTGACTGCCTCTCTCTGATTCTTCTA
TCATCAAACACACAGCTAAAAAATGAAGAAAGAGGTGTTT
CTCTTCTGCTTTTTGGTAACAGCACTGGCTGCATATTCAG
AGTCAGTGAAGCTTCATGGCAGTATGGATGGAGTCCTGCC
CACGTTTCTGCCTTTTGAGTCTAGCACTCAGGATGAAGAC
ACGAGCGAGGAGACTGAGAGCCGTGTGGAGATGAACCAAG
CGGAGGCAGAAGAGCCTGAAGGTTCAGATGGAGGTGAAAA
GAAGGAACCTTTACTCCTGAGTGATGAGGCATTGACTCAG
CTCCTGCAAGAACCCGTGGAGGAGGATGAAGATGATCATT
CTGAGAGTCTGGAGAAAGATGAAGTGATGGACAAGGTGGA
GCAGTCAACAGAAGATGGAGAATCCAAAACCGAGACTGAA
AACGAGGCTGAGAGCAAGGAAGAGGATTCAAAGGACACAG
ACAGCAGTACTGAGTCAGAGATACCAATGGATTTGGACTA
CACAACTGACAGAGATGCTTCTCAGCCACTACCAATCAAA
CTGGATGAGGCTAAAGTTTTAACCACTATGGAGGACACGG
TTGAAGATGTAATCCCCACAGCCACAGCAAGCTATGAATC
CCAGCAATCCAACAGCGACATTGCAGAGGAACAAGAGGAA
CTAGAAGACCAAGCTCAAGAGGAGTTGAAAGAACCTGAGA
ATGACATTGAAAAGGGGAAGAATGATCAGCAGGATGAGAA
GAACATCCTTGAACCTGGTATTTCTGAAGGCAAGATGGCT
A

OTTDART00000048368 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000048368|OTTDARG00000034230|ZDB-GENE-060130-6 sparcl1|OTTDARP00000037949 sparcl1-002 LG_ FP102961.6 Danio rerio protein_coding KNOWN, 801 bp
GAGAGGTGCTTTGACTGACTGCCTCTCTCTGATTCTTCTA
TCATCAAACACACAGCTAAAAAATGAAGAAAGAGGTGTTT
CTCTTCTGCTTTTTGGTAACAGCACTGGCTGCATATTCAG
AGTCAGTGAAGCTTCATGGCAGTATGGATGGAGTCCTGCC
CACGTTTCTGCCTTTTGAGTCTAGCACTCAGGATGAAGAC
ACGAGCGAGGAGACTGAGAGCCGTGTGGAGATGAACCAAG
CGGAGGCAGAAGAGCCTGAAGGTTCAGATGGAGGTGAAAA
GAAGGAACCTTTACTCCTGAGTGATGAGGCATTGACTCAG
CTCCTGCAAGAACCCGTGGAGGAGGATGAAGATGATCATT
CTGAGAGTCTGGAGAAAGATGAAGTGATGGACAAGGTGGA
GCAGTCAACAGAAGATGGAGAATCCAAAACCGAGACTGAA
AACGAGGCTGAGAGCAAGGAAGAGGATTCAAAGGACACAG
ACAGCAGTACTGAGTCAGAGATACCAATGGATTTGGACTA
CACAACTGACAGAGATGCTTCTCAGCCACTACCAATCAAA
CTGGATGAGGCTAAAGTTTTAACCACTATGGAGGACACGG
TTGAAGATGTAATCCCCACAGCCACAGCAAGCTATGAATC
CCAGCAATCCAACAGCGACATTGCAGAGGAACAAGAGGAA
CTAGAAGACCAAGCTCAAGAGGAGTTGAAAGAACCTGAGA
ATGACATTGAAAAGGGGAAGAATGATCAGCAGGATGAGAA
GAACATCCTTGAACCTGGTATTTCTGAAGGCAAGATGGCT
A

Related Transcripts

Transcripts related to sparcl1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	sparcl1-201 (1) Ensembl	Ensembl	2,310 nt	Select Tool
mRNA	sparcl1-202	Ensembl	801 nt
mRNA	sparcl1-204 (1) Ensembl	Ensembl	4,166 nt	Select Tool ZFIN BLAST
ncRNA	sparcl1-003 (1) Ensembl	Ensembl	752 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations