Transcript

cr387932.1-201

ID

ZDB-TSCRIPT-131113-3474

Name

cr387932.1-201 Nomenclature History

Previous Names

ch211-272b8.4-001
ottdart00000051112

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

bloc1s3 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000156213 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000156213.2|gene_biotype:protein_coding|ENSDARG00000097344.2 transcript_biotype:nonsense_mediated_decay gene_symbol:bloc1s3 cdna chromosome:GRCz11:15:35095205:35112786:-1
GGCTGATGGCTGCAGACCATGTGTTTTTATTTTGGTTGTT
TTACTGCTGCTGCCCTCAGCCATCATGGCGTACAGACCAG
TGATTATTATTCATGGGCTATTTGGTGGACCTAAAGAGTT
GACACCCTTTGTGAACTTCATTAAAGAGTCTCATCCAGGT
ACGAGTGTGACTGCACCATCTCTGTATGAATACGCAGCCA
GTGTGAAGCCAATGTGGGTACAGGTGGAAGGCTTTAAAAA
GGTCATTCAACCCATCATGGAGAGCGCTGAAGATGGTGTC
CATCTCATCTGCTATTCGCAAGATGCAGAATCATGGCAAG
CAACAAATTCCAGATCGTGGTTCAGGGAGAAGCCTCTGAA
ACGGACTCTGATGATGAAGTGTACATGACCTCTGCTCCCG
CAGTCCCTGCGTCATTATCCTCCTCCTCGTCAGGGATGAA
GGTGGCAGGAGAGGCATCGGAGACAGACAGCGAGGATGAG
GAGGAGAGAGCGCGAAGACTGATCTCTGAAAGCCAACAGC
AGATGCTCCGCAAAGATCTTCCTCCTCTCATCGTCATCAG
AAACAGCCCAGCTACTGCCTGCGCACAGGAGGAGAGATCA
TCGCCTGTGTCCAGACCCGATGCAGGACGCTTCAACACGT
TGCTCCAGCAGAAACTTCAGGAGAGTAATGCACGGCTGTG
TGTGGATGTCAGTCAAAGCTTAAAACAGGTTTATCAGAAC
GCATCCAAAGACATCCGACAAGCGACCGGACACCTCAACA
ACTCTCAGACGGGCATCATCAATGCCTCGCACAGCATCAG
ACTCATTCTGGAGGACCTGAAGTCCGTTTCAGAGAAGATC
GACATCATCACCAGCTGCAAACTGCTGCCAGACATTACAA
TGCCGAACCCAGGGTCCGTACAGCCCTTAGCCAATGCTGG
ACTCTGAGTTCAG

OTTDART00000051112 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000051112|OTTDARG00000035866|ZDB-GENE-050913-10 bloc1s3|OTTDARP00000040175 CH211-272B8.4-001 LG_ CR387932.20 Danio rerio protein_coding NOVEL, 933 bp
GGCTGATGGCTGCAGACCATGTGTTTTTATTTTGGTTGTT
TTACTGCTGCTGCCCTCAGCCATCATGGCGTACAGACCAG
TGATTATTATTCATGGGCTATTTGGTGGACCTAAAGAGTT
GACACCCTTTGTGAACTTCATTAAAGAGTCTCATCCAGGT
ACGAGTGTGACTGCACCATCTCTGTATGAATACGCAGCCA
GTGTGAAGCCAATGTGGGTACAGGTGGAAGGCTTTAAAAA
GGTCATTCAACCCATCATGGAGAGCGCTGAAGATGGTGTC
CATCTCATCTGCTATTCGCAAGATGCAGAATCATGGCAAG
CAACAAATTCCAGATCGTGGTTCAGGGAGAAGCCTCTGAA
ACGGACTCTGATGATGAAGTGTACATGACCTCTGCTCCCG
CAGTCCCTGCGTCATTATCCTCCTCCTCGTCAGGGATGAA
GGTGGCAGGAGAGGCATCGGAGACAGACAGCGAGGATGAG
GAGGAGAGAGCGCGAAGACTGATCTCTGAAAGCCAACAGC
AGATGCTCCGCAAAGATCTTCCTCCTCTCATCGTCATCAG
AAACAGCCCAGCTACTGCCTGCGCACAGGAGGAGAGATCA
TCGCCTGTGTCCAGACCCGATGCAGGACGCTTCAACACGT
TGCTCCAGCAGAAACTTCAGGAGAGTAATGCACGGCTGTG
TGTGGATGTCAGTCAAAGCTTAAAACAGGTTTATCAGAAC
GCATCCAAAGACATCCGACAAGCGACCGGACACCTCAACA
ACTCTCAGACGGGCATCATCAATGCCTCGCACAGCATCAG
ACTCATTCTGGAGGACCTGAAGTCCGTTTCAGAGAAGATC
GACATCATCACCAGCTGCAAACTGCTGCCAGACATTACAA
TGCCGAACCCAGGGTCCGTACAGCCCTTAGCCAATGCTGG
ACTCTGAGTTCAG

Related Transcripts

Transcripts related to bloc1s3

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	cr387932.1-201	Ensembl	933 nt
mRNA	bloc1s3-201 (1) Ensembl	Ensembl	952 nt	Select Tool
mRNA	bloc1s3-202 (1) Ensembl	Ensembl	1,430 nt	Select Tool
mRNA	bloc1s3-203 (1) Ensembl	Ensembl	4,449 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations