Transcript

trim13-202

ID
ZDB-TSCRIPT-131113-3089
Name
trim13-202 Nomenclature History
Previous Names
  • trim13-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000157265 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000157265.2|gene_biotype:protein_coding|ENSDARG00000010010.11 transcript_biotype:nonsense_mediated_decay gene_symbol:trim13 cdna chromosome:GRCz11:9:29642857:29654998:1
GCATGGGTAATATCAGACATTAAAAACACAAATCTAAAAG
AGATTACTTTACAGCGTTTTCGACACATAATTAAACATCC
GATCAATTTTCTACCTGTGCTGTGCAGTAAGAGCTGTGGA
GAAAGCGCTCACCCGTGGACTGGATCTTGAATTCAAAATA
GCTCTTGTTCTGGTGGAGAGGGGCGTTGGCGAGACAGGCT
CCAGTTCCACAGATCCGCCTCCCGCTTTTCACGATGACCA
CATCCGTCCCTGGGAAAAAAGGCCGAGCAAACTCTCATGC
CCACACAGCTACAACACAAGGACAGGATGGAGCTTTTGGA
GGAGGACCTCACGTGCCCAATCTGCTGCTGTCTGTTCGAG
GACCCGCGCGTTCTGCCCTGCTCTCACAGCTTCTGCAAGA
AGTGTCTGGAGGGTATCCTGGACGGTAACCGGAGCCCTAC
ATGGAGACCACCGTTCAAATGTCCGACCTGTCGAAAGGAG
ACCGTCCACAACGGCATCGCGAGCCTGCAAGTCAATTATT
CCCTACGCGGCATCGTGGAGAAGTACAACAGGATTCGAGT
GATGCCGAGGATGTCTCAGTGCAGAGTTCACAGCGGGCAG
CCGCTCAACATCTTCTGCGCTACAGATCTGAAGCTCATCT
GTGGCTTTTGCGCCACGACAGGTGATCATAAAGGACACAA
GTTTTGCGCACTGGAGGAGGCGTACGAACGGGAGAAGCTC
GCGTTTGAGGAGTTGTTTCGCGTCGTGGAGGGCTGGAAGG
GCGCGGAAGTTCATTCGTGCCTGGAATCGTTAGAGAGTGC
AAAGAAGAAAGCGCTGGAGAGGGTCTCGCGGGACGCGGAT
CGAGTCTCCGAATACTTTGACAAACTTCTGCGCACGCTGG
AGCACAAACGGAGCGAAATCCTTTCGGATTTGGAAACTTT
GAAGCTGGCAGTCATGCAGACCTTTGACCCCGAGATCAAC
CGGCTGCGCTCAGCGCTCGAGGAGCAGCGGCGCGCGCTCA
ACATCGCCGAATCTTTCCGTTCGCTCTCGGATCCGCTCAC
TTTCCTCCAGCAGATGCAGGACTTCAGAGAAAAGTTGCGC
GTCATTCAAGGAACACCACTGCCGTCACGCACTGACATGG
ATGTGAGTTTGTCTGCCCTGCAGAGCTTTGATGTGAAGGA
ATGGGACCGGGTTCGCCTTGGACAGGTAGACAAACTTTGC
GCCCCCTACGAGAGCAGCGCGTACCTGTCATCTCTGCCCC
CGGCTGCCGCTCCGCGGTTCACCCGTGTGATGTGGAGAGT
TGTTCTGGTTGTGTGTGCGTGTCTACCCGCGCTAAACTTT
CTTCCGTCGGACTGTCTCGCTCTGAGCTTCCAGGATAAAG
TGGTTGCACTCGGCGGGTTTTCTTTGCCCAGTCCCGGAGA
GATTGTGCGCTGGCTCGGGTTCTGCTGGAAAGAAGCGGCC
TCGATTTGCACACTACTGACCGAGCTGTGTCGGAACTGTA
TGTTGGACCTGATAAACACAACATCAGATTTCATCAGCTG
ATTTTGTAACTCCATTCATTAGGTCCCAGGAATTGATGCT
GCAGCACATCATGGCCTGCATCTCTGTATCACCACAAACC
ATTCTGTGCTGCTACACCATCACCTAGAGAGCCTCGGCTA
CATGACCGAGCACCGGCAGAACCACAGAGCCAGTGACTCC
GTCCTCTCCTCCTTTCTCTCTCTCTTTCTCTCAGCAGGGC
TTCAGGCATTCCAGGACTCTATCTGAAACACAGAGAGGAG
GACGCTAGAGATCAGAATTTATGGACATCACGGCAAACAC
AGATTTCAACTTTCCTGCACTGCACGAAAAGCCGGTCCTC
AAAAATAATGGTATTAAAAGGAAAGTTACTAGCAATATTG
ACATCTACACCAGACTGAAATAATCCTCCAATATGGTGAT
TCAGCACTGACAACATTCTGCCTCTTACTCATCTACATCA
CCAGGAACCAAATCAACCGTCAGCTTCCCAAAGTACCGTA
TCCCCGACAGGAGACATCTCTTATCCATGTTATGCTTTCT
TAGATCTTCCGTACAGCTATAAAAAAATCTGATAAAC

OTTDART00000059690 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000059690|OTTDARG00000032836|ZDB-GENE-050522-516 trim13|OTTDARP00000046424 trim13-002 LG_ CU855930.12 Danio rerio protein_coding KNOWN, 2077 bp
GCATGGGTAATATCAGACATTAAAAACACAAATCTAAAAG
AGATTACTTTACAGCGTTTTCGACACATAATTAAACATCC
GATCAATTTTCTACCTGTGCTGTGCAGTAAGAGCTGTGGA
GAAAGCGCTCACCCGTGGACTGGATCTTGAATTCAAAATA
GCTCTTGTTCTGGTGGAGAGGGGCGTTGGCGAGACAGGCT
CCAGTTCCACAGATCCGCCTCCCGCTTTTCACGATGACCA
CATCCGTCCCTGGGAAAAAAGGCCGAGCAAACTCTCATGC
CCACACAGCTACAACACAAGGACAGGATGGAGCTTTTGGA
GGAGGACCTCACGTGCCCAATCTGCTGCTGTCTGTTCGAG
GACCCGCGCGTTCTGCCCTGCTCTCACAGCTTCTGCAAGA
AGTGTCTGGAGGGTATCCTGGACGGTAACCGGAGCCCTAC
ATGGAGACCACCGTTCAAATGTCCGACCTGTCGAAAGGAG
ACCGTCCACAACGGCATCGCGAGCCTGCAAGTCAATTATT
CCCTACGCGGCATCGTGGAGAAGTACAACAGGATTCGAGT
GATGCCGAGGATGTCTCAGTGCAGAGTTCACAGCGGGCAG
CCGCTCAACATCTTCTGCGCTACAGATCTGAAGCTCATCT
GTGGCTTTTGCGCCACGACAGGTGATCATAAAGGACACAA
GTTTTGCGCACTGGAGGAGGCGTACGAACGGGAGAAGCTC
GCGTTTGAGGAGTTGTTTCGCGTCGTGGAGGGCTGGAAGG
GCGCGGAAGTTCATTCGTGCCTGGAATCGTTAGAGAGTGC
AAAGAAGAAAGCGCTGGAGAGGGTCTCGCGGGACGCGGAT
CGAGTCTCCGAATACTTTGACAAACTTCTGCGCACGCTGG
AGCACAAACGGAGCGAAATCCTTTCGGATTTGGAAACTTT
GAAGCTGGCAGTCATGCAGACCTTTGACCCCGAGATCAAC
CGGCTGCGCTCAGCGCTCGAGGAGCAGCGGCGCGCGCTCA
ACATCGCCGAATCTTTCCGTTCGCTCTCGGATCCGCTCAC
TTTCCTCCAGCAGATGCAGGACTTCAGAGAAAAGTTGCGC
GTCATTCAAGGAACACCACTGCCGTCACGCACTGACATGG
ATGTGAGTTTGTCTGCCCTGCAGAGCTTTGATGTGAAGGA
ATGGGACCGGGTTCGCCTTGGACAGGTAGACAAACTTTGC
GCCCCCTACGAGAGCAGCGCGTACCTGTCATCTCTGCCCC
CGGCTGCCGCTCCGCGGTTCACCCGTGTGATGTGGAGAGT
TGTTCTGGTTGTGTGTGCGTGTCTACCCGCGCTAAACTTT
CTTCCGTCGGACTGTCTCGCTCTGAGCTTCCAGGATAAAG
TGGTTGCACTCGGCGGGTTTTCTTTGCCCAGTCCCGGAGA
GATTGTGCGCTGGCTCGGGTTCTGCTGGAAAGAAGCGGCC
TCGATTTGCACACTACTGACCGAGCTGTGTCGGAACTGTA
TGTTGGACCTGATAAACACAACATCAGATTTCATCAGCTG
ATTTTGTAACTCCATTCATTAGGTCCCAGGAATTGATGCT
GCAGCACATCATGGCCTGCATCTCTGTATCACCACAAACC
ATTCTGTGCTGCTACACCATCACCTAGAGAGCCTCGGCTA
CATGACCGAGCACCGGCAGAACCACAGAGCCAGTGACTCC
GTCCTCTCCTCCTTTCTCTCTCTCTTTCTCTCAGCAGGGC
TTCAGGCATTCCAGGACTCTATCTGAAACACAGAGAGGAG
GACGCTAGAGATCAGAATTTATGGACATCACGGCAAACAC
AGATTTCAACTTTCCTGCACTGCACGAAAAGCCGGTCCTC
AAAAATAATGGTATTAAAAGGAAAGTTACTAGCAATATTG
ACATCTACACCAGACTGAAATAATCCTCCAATATGGTGAT
TCAGCACTGACAACATTCTGCCTCTTACTCATCTACATCA
CCAGGAACCAAATCAACCGTCAGCTTCCCAAAGTACCGTA
TCCCCGACAGGAGACATCTCTTATCCATGTTATGCTTTCT
TAGATCTTCCGTACAGCTATAAAAAAATCTGATAAAC

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations