Transcript

cdkl5-201

ID
ZDB-TSCRIPT-131113-1825
Name
cdkl5-201 Nomenclature History
Previous Names
  • cdkl5-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000127502 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000127502.4|gene_biotype:protein_coding|ENSDARG00000015240.11 transcript_biotype:protein_coding gene_symbol:cdkl5 cdna chromosome:GRCz11:11:30162407:30232133:1
ACCACCTCGGCATCTTTTGACTTCATGAAGATTCCTGACA
TCGGTAATGTGATGAATAAATTTGAGGTCCTTGGGATTGT
AGGAGAGGGAGCCTATGGGGTGGTCCTGAAATGCAGACAC
AAGGAGACAAAAGAGCTTGTGGCCATTAAGAAGTTCAAGG
ACAGTGAAGAGAATGAGGAAGTTAAAGAGACGACGTTACG
GGAGCTGAAGATGCTCCGTACGCTCAAACAAGACAACATC
GTAGAGCTGAAAGAGGCTTTCCGTCGACGGGGAAAACTCT
ACCTGGTGTTTGAATATGTGGAGAAGAATATGCTGGAGTT
ATTAGAGGAACTGCCCAATGGTGCACTGCCTGATAAAGTA
CGAAGCTACATCTTTCAGCTAATCAAAGCTATTCACTGGT
GCCATAAGAATGAGATCGTCCACAGAGATATCAAGCCTGA
GAATCTCCTCATCAGCGCCAATGATATCCTGAAGCTGTGT
GATTTCGGCTTTGCCCGAAATCTGTCTGAAGGTAGCGATG
CCAACTATACCGAGTACGTGGCTACTAGGTGGTACCGCTC
ACCTGAACTGCTCCTCGGGGCTCCATATGGGAAGGCGGTG
GACATGTGGTCGGTGGGGTGTATTTTGGGAGAGCTCAGTG
ATGGGCAGCCCCTGTTTCCGGGCGAGAGTGAAATCGACCA
GCTCTTCACTATTCAGAAGGTGTTGGGCCCTCTACCACCA
GAGCAGATGAAGCTGTTCTACAGCAACCCTCGTTTCGCCG
GACTGAGATTTCCTTCTGTAAGTCACCCTCAGACGCTTGA
TCGAAGGTACCTGGGCATCATCAATGGACTCATGTTGGAT
TTAATGAAGAACCTGCTGTGCCTGAACCCTACCGAACGCT
TTCTGACAGAGCAGTGTCTGAACCACCCAGTGTTTCAAGG
TCTGAGAGGGCCTGAGCAGCCAGCTGTCCCGTCACCCACC
CCGCCGCGCTCCTCCAAGAGAAAACCCTATCACGGAGACA
ACACCATACCCAGCCGAAGTCACGGCAGTAAGAGTTCAAG
TCACCGGCGTGCGAACAGCAAAGACTGCTCCTCTCTACCA
CGCCATGAGGACCTCCACCGGAGCACCGACAGCTTCCTAA
ATGGCACCAACATGCCAACGTCATCCACCCTGAGTCCTAC
ACTACACCCCAAAAGCTACCAGGCCCAGACTCTCAGCCGC
TCGGCCTCTTCCAACAAAGACCTGGCCAACAACAACCTTC
CGCATCTCCTCAGCCCTAAAGATGCGAAAGGAAAGACAGA
GTTTGATTTCAATCTGGGGCCTAAAGTTGGAGTTGCCTCC
GTGGGTATGGACACATCTACCGGCAAGTACCTCAAATCAT
CCAAACAAGGCCGTCACTCATCCTTCCTGGAAGGAAAGAC
CAGCACGCTGCAGTCCGGGGACAAGCACAGTCGGCACAAC
TACATGGAGTCCTCACACGGATCCATGCCTTCCACGTCCT
CCTCCAAAAGCTCCTCATCCTTCCTCAGCTTGTCCAAAAG
CCACGGCGCACTTAATGACGCCAAGTCTGTGAGCAATCTA
GCAGAGACACGACTCCACCTGGATGATCCTATGGCAGGAT
CCGGTTCAGGCTCTCGATATTTCCCGTCCAGCTGCCTGGA
TCTAAACGCAGCTCCTGGTAGCCCCAGAGGTGAACGGCAT
GCTGGGACGGAGCGGCAGGGTCACAGTCCCAGTGGCCGGG
GGAGCAATCGCCTTGAAGGGGGCACTCTGGACTCGCGGCG
CTCCTCGGGACGGAAAAAGACACCAGATGAACCGAAGCCT
ACTGATACTCTGGATCCAAGCAGAGCTGCGGGAGGCCATG
CTCACAATCTCCCGTCGCCACATGAATCCTATCCTTACGG
TCTTGGATACACCAGCCCGTTCTCCTCGCAGCAGCGACCT
CATCGGCACTCTATGTATGTGCGGAGAGAGCGACACCGGC
CGCACGGCCAGGAGAACAATTTGGTGGTTGGACAGGGAGT
GCCAACGCGTGCCAGCAGCCTACAGCTCCTTTCGCCGCAG
CTTCAGCACCGCACACTCCCACGCCACAACACCAGTTCCT
CCAGAGAAGAGCTCACGCCAGAGCTCAGCAGGAATGACCA
GTCTCCCAAAGAGAAGCCTCATTCTCGCCCCCTGATTAAA
GATTCGACGAGGGACAACACAGCTACCTTCCACACACAAC
GCCCAAAAAACGAGGCTGGGATGTACCACGACGCTCATAT
GGAGGACGGGACCTCATCCAAGGAGAACAGAATCATCTAC
AGTGACTCGATGCCTCGCAGAGTGGGAAGCTTTTACAGAG
TCCCATCTCCTCGACCTGACAACACGTTTCTTGAGACCAC
TGGACAGAGCAGAGTGCAAGCGGTGGCGGCAGAAAACCCA
ACCATGACAAACCACTCCAAACGTCAGACCAATTTTGACC
CCTGGAATAATTCAGAGGCGATGGTTATGAACCCACCAGA
GGTCCCGAAACAAAAAGAAAAACAAGGTTTCTTTCGAGCC
ATAAAGAAGAAAAAGAAAAAATCGCAGCCGACGGACGGCA
ACGCGGGAAGGAACCCGAGCATCAAGAAAAGCCTTTTCCC
CCTCTTTAACTCAAAGAATAGCTTAAAGCATAACTCTTCT
GTCAAAGTGCTCCCTGTTGTCCCGCAGCCCATGGTACCTA
GTGAAACCCAGCAGGACCAGCTCGTTTTACAGAGACCGGT
CAAATCCTCGTCTCATCACAGCAGTCGACACCGCAACCGA
GACCGCGAGCGCGAACGGGACATGGAGAGGGACAGAGAGC
GTGAGCGGGACCGAAACCGCGACAGAGATCGTGAGCGGGA
CAGGGACAACACTTGGCCTCCAGAGAAGCAGCCGGAAGTG
CAGCCTCAGAACCAGCCTCTGAAGTCCCTGCGGAAGCTCC
TCCACCTCTCCTCTCCTGCTACATCCAATCAGCCTCCACC
TCCTGATCGCTCGGCCGAACTGCGCTTCCAGCCCCTTCCA
AATCCCCCCTCTAAAGCCAACCTGAACGAGGTCAGAGGAC
ACCCGGCGGGCAGCGTCACCCCCAACACCAAAAGCCGCAA
ACCCCACAACTACCCTCTGCCAGGCCAGATTGAATCCAGC
TGGCACGTCTCTGCTCTGAATCGGGCAGAGGGTGCGCCAT
ACCCCGACCAATTGGCAAACAAAGGTGGGCAGAACGGTAT
CGGCTTCACTAGAGCCGCTCGCACCAGGATGCCGAACCTC
AATGATCTGAAAGAAACGGCCCTTTAGAGAAGGAAGGCCC
CCTGGTGGCCGCTTGGTGTACTCGTTTTTCCCTCCTTTTC
CTTCCTGGCTACCTATGGAATGCTATTGTTCATACAGTGG
TACTCAATGCCACTTCTGGCCAGAAGGTGGCAATAGTTAT
GTCTCAGATTTGTTTTTTAAAGCATCCACATTTGATAGAA
TTTGTATTATTGTTCATTACATCTGGGTTCAGTTTTCTGT
TGAATATATCTTATTGACGACGATGATATGAATCTATGTA
TTTGTATATGGAAACTTAGGGACGGGGGAACGACAAAAAA
ACTAAAAAAATCTGTGGAATTGTAAGAGCTTTAGTTTATA
CACAAGAGAATGTATACATATTTAATGTGTAATAATTCTA
TATTTCATGGAGATTATTTAAGGAATTATCGGTGTGTTAA
TAGTTACCATGTACAGAGTGCATTTTATGGTTGTAACAAA
AGTACTTATTGTTTCAGAGTTATTTTCCTCTCTGTGTTTT
CTGATATGAATTCTACAGTGCGGACTAGGTCTATATTACA
CACTGTCTCATACTGCAGGTTAATGAGTCCATCGGTTATT
GAATCAGCCCTATTTAAAACGGCATATCAGCAAACTACTG
ATGCTTCCTAACCAGGTTCTGTGTTATTTTTCATTAAATC
CACATCCCATGATGGC

OTTDART00000050293 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000050293|OTTDARG00000035353|ZDB-GENE-081022-110 cdkl5|OTTDARP00000039476 cdkl5-001 LG_ CR790368.17 Danio rerio protein_coding KNOWN, 3936 bp
ACCACCTCGGCATCTTTTGACTTCATGAAGATTCCTGACA
TCGGTAATGTGATGAATAAATTTGAGGTCCTTGGGATTGT
AGGAGAGGGAGCCTATGGGGTGGTCCTGAAATGCAGACAC
AAGGAGACAAAAGAGCTTGTGGCCATTAAGAAGTTCAAGG
ACAGTGAAGAGAATGAGGAAGTTAAAGAGACGACGTTACG
GGAGCTGAAGATGCTCCGTACGCTCAAACAAGACAACATC
GTAGAGCTGAAAGAGGCTTTCCGTCGACGGGGAAAACTCT
ACCTGGTGTTTGAATATGTGGAGAAGAATATGCTGGAGTT
ATTAGAGGAACTGCCCAATGGTGCACTGCCTGATAAAGTA
CGAAGCTACATCTTTCAGCTAATCAAAGCTATTCACTGGT
GCCATAAGAATGAGATCGTCCACAGAGATATCAAGCCTGA
GAATCTCCTCATCAGCGCCAATGATATCCTGAAGCTGTGT
GATTTCGGCTTTGCCCGAAATCTGTCTGAAGGTAGCGATG
CCAACTATACCGAGTACGTGGCTACTAGGTGGTACCGCTC
ACCTGAACTGCTCCTCGGGGCTCCATATGGGAAGGCGGTG
GACATGTGGTCGGTGGGGTGTATTTTGGGAGAGCTCAGTG
ATGGGCAGCCCCTGTTTCCGGGCGAGAGTGAAATCGACCA
GCTCTTCACTATTCAGAAGGTGTTGGGCCCTCTACCACCA
GAGCAGATGAAGCTGTTCTACAGCAACCCTCGTTTCGCCG
GACTGAGATTTCCTTCTGTAAGTCACCCTCAGACGCTTGA
TCGAAGGTACCTGGGCATCATCAATGGACTCATGTTGGAT
TTAATGAAGAACCTGCTGTGCCTGAACCCTACCGAACGCT
TTCTGACAGAGCAGTGTCTGAACCACCCAGTGTTTCAAGG
TCTGAGAGGGCCTGAGCAGCCAGCTGTCCCGTCACCCACC
CCGCCGCGCTCCTCCAAGAGAAAACCCTATCACGGAGACA
ACACCATACCCAGCCGAAGTCACGGCAGTAAGAGTTCAAG
TCACCGGCGTGCGAACAGCAAAGACTGCTCCTCTCTACCA
CGCCATGAGGACCTCCACCGGAGCACCGACAGCTTCCTAA
ATGGCACCAACATGCCAACGTCATCCACCCTGAGTCCTAC
ACTACACCCCAAAAGCTACCAGGCCCAGACTCTCAGCCGC
TCGGCCTCTTCCAACAAAGACCTGGCCAACAACAACCTTC
CGCATCTCCTCAGCCCTAAAGATGCGAAAGGAAAGACAGA
GTTTGATTTCAATCTGGGGCCTAAAGTTGGAGTTGCCTCC
GTGGGTATGGACACATCTACCGGCAAGTACCTCAAATCAT
CCAAACAAGGCCGTCACTCATCCTTCCTGGAAGGAAAGAC
CAGCACGCTGCAGTCCGGGGACAAGCACAGTCGGCACAAC
TACATGGAGTCCTCACACGGATCCATGCCTTCCACGTCCT
CCTCCAAAAGCTCCTCATCCTTCCTCAGCTTGTCCAAAAG
CCACGGCGCACTTAATGACGCCAAGTCTGTGAGCAATCTA
GCAGAGACACGACTCCACCTGGATGATCCTATGGCAGGAT
CCGGTTCAGGCTCTCGATATTTCCCGTCCAGCTGCCTGGA
TCTAAACGCAGCTCCTGGTAGCCCCAGAGGTGAACGGCAT
GCTGGGACGGAGCGGCAGGGTCACAGTCCCAGTGGCCGGG
GGAGCAATCGCCTTGAAGGGGGCACTCTGGACTCGCGGCG
CTCCTCGGGACGGAAAAAGACACCAGATGAACCGAAGCCT
ACTGATACTCTGGATCCAAGCAGAGCTGCGGGAGGCCATG
CTCACAATCTCCCGTCGCCACATGAATCCTATCCTTACGG
TCTTGGATACACCAGCCCGTTCTCCTCGCAGCAGCGACCT
CATCGGCACTCTATGTATGTGCGGAGAGAGCGACACCGGC
CGCACGGCCAGGAGAACAATTTGGTGGTTGGACAGGGAGT
GCCAACGCGTGCCAGCAGCCTACAGCTCCTTTCGCCGCAG
CTTCAGCACCGCACACTCCCACGCCACAACACCAGTTCCT
CCAGAGAAGAGCTCACGCCAGAGCTCAGCAGGAATGACCA
GTCTCCCAAAGAGAAGCCTCATTCTCGCCCCCTGATTAAA
GATTCGACGAGGGACAACACAGCTACCTTCCACACACAAC
GCCCAAAAAACGAGGCTGGGATGTACCACGACGCTCATAT
GGAGGACGGGACCTCATCCAAGGAGAACAGAATCATCTAC
AGTGACTCGATGCCTCGCAGAGTGGGAAGCTTTTACAGAG
TCCCATCTCCTCGACCTGACAACACGTTTCTTGAGACCAC
TGGACAGAGCAGAGTGCAAGCGGTGGCGGCAGAAAACCCA
ACCATGACAAACCACTCCAAACGTCAGACCAATTTTGACC
CCTGGAATAATTCAGAGGCGATGGTTATGAACCCACCAGA
GGTCCCGAAACAAAAAGAAAAACAAGGTTTCTTTCGAGCC
ATAAAGAAGAAAAAGAAAAAATCGCAGCCGACGGACGGCA
ACGCGGGAAGGAACCCGAGCATCAAGAAAAGCCTTTTCCC
CCTCTTTAACTCAAAGAATAGCTTAAAGCATAACTCTTCT
GTCAAAGTGCTCCCTGTTGTCCCGCAGCCCATGGTACCTA
GTGAAACCCAGCAGGACCAGCTCGTTTTACAGAGACCGGT
CAAATCCTCGTCTCATCACAGCAGTCGACACCGCAACCGA
GACCGCGAGCGCGAACGGGACATGGAGAGGGACAGAGAGC
GTGAGCGGGACCGAAACCGCGACAGAGATCGTGAGCGGGA
CAGGGACAACACTTGGCCTCCAGAGAAGCAGCCGGAAGTG
CAGCCTCAGAACCAGCCTCTGAAGTCCCTGCGGAAGCTCC
TCCACCTCTCCTCTCCTGCTACATCCAATCAGCCTCCACC
TCCTGATCGCTCGGCCGAACTGCGCTTCCAGCCCCTTCCA
AATCCCCCCTCTAAAGCCAACCTGAACGAGGTCAGAGGAC
ACCCGGCGGGCAGCGTCACCCCCAACACCAAAAGCCGCAA
ACCCCACAACTACCCTCTGCCAGGCCAGATTGAATCCAGC
TGGCACGTCTCTGCTCTGAATCGGGCAGAGGGTGCGCCAT
ACCCCGACCAATTGGCAAACAAAGGTGGGCAGAACGGTAT
CGGCTTCACTAGAGCCGCTCGCACCAGGATGCCGAACCTC
AATGATCTGAAAGAAACGGCCCTTTAGAGAAGGAAGGCCC
CCTGGTGGCCGCTTGGTGTACTCGTTTTTCCCTCCTTTTC
CTTCCTGGCTACCTATGGAATGCTATTGTTCATACAGTGG
TACTCAATGCCACTTCTGGCCAGAAGGTGGCAATAGTTAT
GTCTCAGATTTGTTTTTTAAAGCATCCACATTTGATAGAA
TTTGTATTATTGTTCATTACATCTGGGTTCAGTTTTCTGT
TGAATATATCTTATTGACGACGATGATATGAATCTATGTA
TTTGTATATGGAAACTTAGGGACGGGGGAACGACAAAAAA
ACTAAAAAAATCTGTGGAATTGTAAGAGCTTTAGTTTATA
CACAAGAGAATGTATACATATTTAATGTGTAATAATTCTA
TATTTCATGGAGATTATTTAAGGAATTATCGGTGTGTTAA
TAGTTACCATGTACAGAGTGCATTTTATGGTTGTAACAAA
AGTACTTATTGTTTCAGAGTTATTTTCCTCTCTGTGTTTT
CTGATATGAATTCTACAGTGCGGACTAGGTCTATATTACA
CACTGTCTCATACTGCAGGTTAATGAGTCCATCGGTTATT
GAATCAGCCCTATTTAAAACGGCATATCAGCAAACTACTG
ATGCTTCCTAACCAGGTTCTGTGTTATTTTTCATTAAATC
CACATCCCATGATGGC

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations