Transcript

msra-202

ID
ZDB-TSCRIPT-130528-162
Name
msra-202 Nomenclature History
Previous Names
  • msra-002
  • dkey-166k9.1-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000153122 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000153122.2|gene_biotype:protein_coding|ENSDARG00000029587.8 transcript_biotype:nonsense_mediated_decay gene_symbol:msraa cdna chromosome:GRCz11:20:38910241:39046180:1
TGCAATCGTTACACACGTGCCGCGTGTTTTGTGCTGATGG
TCGCGCGAACTTCCGTGCGTTTGATCTGGCGTCAATTTAT
CCAAAGTAGAATGGGAGAAATGTCTTCCAAAGTGCAAATG
ATATCGCCGGAGGAAGCGCTGCCTGGAAGGGAGCAGAGCA
TTAAAGTGTCAGCTAAGCACGACGTGAATGGTAACAGGAC
AGTGCCACCGTTCCCAGAGGGATTGCAGATGGTCTTATTC
GGCCTCAAACTGTGTAATTCATCATGGCAGACAGGAATTA
AAAGGCGGTTCTATCACAGGGCCTTGTATACAAATACAAT
ACCATTCAGAGGATGTATGCAGCTTTTCAAATCACAAACC
TCCCGCTGAGACCGATGAAGGGTATGGGTTGTTTCTGGGG
AGCGGAGAGGAAATTCTGGAGGCAAAAGGGGGTTTATTCC
ACTCAAGTGGGCTATTCAGGCGGTTACACCCCAAACCCTA
CCTATGAGGAGGTCTGCACTGGTAAAACAGGACACACAGA
GGTGGTCCGGGTGGTCTTTGAGCCTCAGAAAATCAAATTT
TCTGAGCTGCTCAAGGTGTTCTGGGAGAGCCACAATCCCA
CCCAAGGAATGCGTCAGGGCAATGATGTCGGGACAACTTA
TCGATCCAGCATCTACACAAACACACAGGAACAGCTGGAG
CAGGCTCTGCAGTCCAGGGAAGAGTATCAGAAGGTGCTGA
CCGAAGAAGGTTTTGGAGCCATTACCACAGAAATAACCAT
GGCCAAGGAGTTCTACTATGCAGAAGACTATCACCAGCAG
TACCTCAGCAAGAACCCTGATGGCTACTGTGGACTAGGCG
GCACCGGGGTCTCTTGTCCTATAGGGCTGAAGAGTAAACA
TTAGCACATTTGTCCTGTGGAAAATTAAAGTTTATTACCT
TGCCTTAACTAAAGCAATTACCACTGCAATACCCAGGCCT
TTATATTCTTGTTGGATAGAAATAAAAATTGTGTTGCGCT
TC

OTTDART00000058669 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000058669|OTTDARG00000006086|ZDB-GENE-041014-344 msra|OTTDARP00000045842 DKEY-166K9.1-002 LG_none BX511178.6,BX569784.17 Danio rerio protein_coding KNOWN, 1002 bp
TGCAATCGTTACACACGTGCCGCGTGTTTTGTGCTGATGG
TCGCGCGAACTTCCGTGCGTTTGATCTGGCGTCAATTTAT
CCAAAGTAGAATGGGAGAAATGTCTTCCAAAGTGCAAATG
ATATCGCCGGAGGAAGCGCTGCCTGGAAGGGAGCAGAGCA
TTAAAGTGTCAGCTAAGCACGACGTGAATGGTAACAGGAC
AGTGCCACCGTTCCCAGAGGGATTGCAGATGGTCTTATTC
GGCCTCAAACTGTGTAATTCATCATGGCAGACAGGAATTA
AAAGGCGGTTCTATCACAGGGCCTTGTATACAAATACAAT
ACCATTCAGAGGATGTATGCAGCTTTTCAAATCACAAACC
TCCCGCTGAGACCGATGAAGGGTATGGGTTGTTTCTGGGG
AGCGGAGAGGAAATTCTGGAGGCAAAAGGGGGTTTATTCC
ACTCAAGTGGGCTATTCAGGCGGTTACACCCCAAACCCTA
CCTATGAGGAGGTCTGCACTGGTAAAACAGGACACACAGA
GGTGGTCCGGGTGGTCTTTGAGCCTCAGAAAATCAAATTT
TCTGAGCTGCTCAAGGTGTTCTGGGAGAGCCACAATCCCA
CCCAAGGAATGCGTCAGGGCAATGATGTCGGGACAACTTA
TCGATCCAGCATCTACACAAACACACAGGAACAGCTGGAG
CAGGCTCTGCAGTCCAGGGAAGAGTATCAGAAGGTGCTGA
CCGAAGAAGGTTTTGGAGCCATTACCACAGAAATAACCAT
GGCCAAGGAGTTCTACTATGCAGAAGACTATCACCAGCAG
TACCTCAGCAAGAACCCTGATGGCTACTGTGGACTAGGCG
GCACCGGGGTCTCTTGTCCTATAGGGCTGAAGAGTAAACA
TTAGCACATTTGTCCTGTGGAAAATTAAAGTTTATTACCT
TGCCTTAACTAAAGCAATTACCACTGCAATACCCAGGCCT
TTATATTCTTGTTGGATAGAAATAAAAATTGTGTTGCGCT
TC

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations