Transcript

cgrrf1-202

ID

ZDB-TSCRIPT-121213-564

Name

cgrrf1-202 Nomenclature History

Previous Names

cgrrf1-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

cgrrf1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000152618 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000152618.2|gene_biotype:protein_coding|ENSDARG00000037040.7 transcript_biotype:nonsense_mediated_decay gene_symbol:cgrrf1 cdna chromosome:GRCz11:20:9777179:9780867:-1
GACAGACGCAAAGCAAGACAAGACTCAAAGCAACCGCGGT
TTAATAAAAGAAAACAGTATTTATTCGCACCGTATTAATG
TAACATTTTAAGCATGGCCGCGGAGTTTTTAGTGATGTTG
TATGAATACTCTCCTCTCTTTTATATTGCTGTTATATCAT
TGTGTTTCATCATCACTGTGGCGGTTGTGTTGGGCTGGTT
TGGGTTTGATGTTCCAGTCATTTTGCGCAGTTCAGATGAG
TCTGAATCTGTCATTCCTGTGCCTGAGAGGAAGATGGTGC
AGGTGATCAATCCCTTCGCCTTGGAGGTCAACTCTACTTC
TGCTTCAGTAACCGAGGGTGTGAGTTTGCTGCCATGCTGT
CTTGAAGACTGTGTCCTGAGCTGTTTCTGGGGCTGTGGAG
TCCAGGCTCTTCAGACGGCCCTTCAGAGTCACCAGCTTGA
GCTACGGTTCAACACTGCAGAACTGTTTCAAGAGGCTCTG
GGGTCGAGTTGCCGTCACCACCAAACATTCAAAAAGAAGA
AAGGGAAGAATATTTCACCCAGATGCCACCAGCTCTTGAA
GTAACAGATTTTGGGCTGCTTCCTCGGGATCGATACCCAT
TGGTGGCTGTGCTGACACTAGCCCATCCGGAAACCAGGGA
TAACTACAACATTGCATCTAGTGTGACTGTGATCCACGTT
CCTGATGACAAGTACAGGCTCTCCACCAGAATCTTGTTCC
AGTATCTGCTCACAGCACACGGGACCTTGTACGATCTGAA
G

OTTDART00000058032 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000058032|OTTDARG00000004036|ZDB-GENE-040724-100 cgrrf1|OTTDARP00000045447 cgrrf1-002 LG_ AL954679.7 Danio rerio protein_coding KNOWN, 761 bp
GACAGACGCAAAGCAAGACAAGACTCAAAGCAACCGCGGT
TTAATAAAAGAAAACAGTATTTATTCGCACCGTATTAATG
TAACATTTTAAGCATGGCCGCGGAGTTTTTAGTGATGTTG
TATGAATACTCTCCTCTCTTTTATATTGCTGTTATATCAT
TGTGTTTCATCATCACTGTGGCGGTTGTGTTGGGCTGGTT
TGGGTTTGATGTTCCAGTCATTTTGCGCAGTTCAGATGAG
TCTGAATCTGTCATTCCTGTGCCTGAGAGGAAGATGGTGC
AGGTGATCAATCCCTTCGCCTTGGAGGTCAACTCTACTTC
TGCTTCAGTAACCGAGGGTGTGAGTTTGCTGCCATGCTGT
CTTGAAGACTGTGTCCTGAGCTGTTTCTGGGGCTGTGGAG
TCCAGGCTCTTCAGACGGCCCTTCAGAGTCACCAGCTTGA
GCTACGGTTCAACACTGCAGAACTGTTTCAAGAGGCTCTG
GGGTCGAGTTGCCGTCACCACCAAACATTCAAAAAGAAGA
AAGGGAAGAATATTTCACCCAGATGCCACCAGCTCTTGAA
GTAACAGATTTTGGGCTGCTTCCTCGGGATCGATACCCAT
TGGTGGCTGTGCTGACACTAGCCCATCCGGAAACCAGGGA
TAACTACAACATTGCATCTAGTGTGACTGTGATCCACGTT
CCTGATGACAAGTACAGGCTCTCCACCAGAATCTTGTTCC
AGTATCTGCTCACAGCACACGGGACCTTGTACGATCTGAA
G

Related Transcripts

Transcripts related to cgrrf1

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
aberrant processed transcript	cgrrf1-202	Ensembl		761 nt
mRNA	cgrrf1-201 (1) Ensembl	Ensembl		1,402 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations