Transcript

carm1-203

ID

ZDB-TSCRIPT-120213-961

Name

carm1-203 Nomenclature History

Previous Names

carm-002
carm1-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

carm1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000151562 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000151562.2|gene_biotype:protein_coding|ENSDARG00000018698.10 transcript_biotype:nonsense_mediated_decay gene_symbol:carm1 cdna chromosome:GRCz11:3:34161217:34171032:1
GGCAGGGGACACAATGTCAGGCACTGCACTTTTAATCGCC
AACAAGAGACAAAGCTACGATATTAGTATTGTTGCTCAAG
TGGATCAGACAGGCTCCAAATCCAGTAATCTACTTGATCT
CAAGAACCCTTTCTTCCGGGATGCCTACAGCCTATGACCT
CAGTACTGTCATTGGTGGCAGTGGGACAACCGTGTCCCAC
AACAATCTCATCCCCCTTGGTACAGACACGCATGCACTGA
ACACGGGGATCGTGAACCACACTCACTCCAGAATGGGCTC
TATAATGAGCACAGGAATCGTCCAGGGGGCAACAACTGCG
CAGCAGGGTCCAAGCAGCGCCAGTCTTCATTACCCCGTCA
CCAACCAGTTCACCATGGGCGGCCCGGCGATCTCCATGGC
ATCTCCAATGGCCATCCCCAGCAACACCATGCACTACGGG
AGCTAAGGCTGAGGGGACGGCCTCTGCATGTCCGATTCTC
CAAACGTCCCCTTTACCCCCCCTGCAAACCAACAGCCAAA
TTCAGAAAACCAAAACCAGTGCACCAGTCTCTGACCATCA
CTTTATACTCTCTCTCTGTCTCTACATATATATATATATA
GATATACATGTATACTTATATGTATATATTCTAAAATTTC
TTTCACTGGCGTTTTATTCTTACATATCCGTCCCGCGGCC
CTATAATGTTAGCGTGCGCAGGCATTTGGCCAGTTCAACG
TGCCTGAGTTGTCACTGTTACTCACAAATCCCCCTCCTCC
AAAGCCACATGCAGCGCCTGCTCCACAACCAGCCACTAGG
AGGCAGCACTTGTCTGTAAGCATGCTG

OTTDART00000053589 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000053589|OTTDARG00000004595|ZDB-GENE-040724-77 carm1|OTTDARP00000042149 carm-002 LG_ BX649502.4 Danio rerio protein_coding KNOWN, 827 bp
GGCAGGGGACACAATGTCAGGCACTGCACTTTTAATCGCC
AACAAGAGACAAAGCTACGATATTAGTATTGTTGCTCAAG
TGGATCAGACAGGCTCCAAATCCAGTAATCTACTTGATCT
CAAGAACCCTTTCTTCCGGGATGCCTACAGCCTATGACCT
CAGTACTGTCATTGGTGGCAGTGGGACAACCGTGTCCCAC
AACAATCTCATCCCCCTTGGTACAGACACGCATGCACTGA
ACACGGGGATCGTGAACCACACTCACTCCAGAATGGGCTC
TATAATGAGCACAGGAATCGTCCAGGGGGCAACAACTGCG
CAGCAGGGTCCAAGCAGCGCCAGTCTTCATTACCCCGTCA
CCAACCAGTTCACCATGGGCGGCCCGGCGATCTCCATGGC
ATCTCCAATGGCCATCCCCAGCAACACCATGCACTACGGG
AGCTAAGGCTGAGGGGACGGCCTCTGCATGTCCGATTCTC
CAAACGTCCCCTTTACCCCCCCTGCAAACCAACAGCCAAA
TTCAGAAAACCAAAACCAGTGCACCAGTCTCTGACCATCA
CTTTATACTCTCTCTCTGTCTCTACATATATATATATATA
GATATACATGTATACTTATATGTATATATTCTAAAATTTC
TTTCACTGGCGTTTTATTCTTACATATCCGTCCCGCGGCC
CTATAATGTTAGCGTGCGCAGGCATTTGGCCAGTTCAACG
TGCCTGAGTTGTCACTGTTACTCACAAATCCCCCTCCTCC
AAAGCCACATGCAGCGCCTGCTCCACAACCAGCCACTAGG
AGGCAGCACTTGTCTGTAAGCATGCTG

Related Transcripts

Transcripts related to carm1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	carm1-203	Ensembl	827 nt
mRNA	carm1-201 (1) Ensembl	Ensembl	3,334 nt	Select Tool
mRNA	carm1-202 (1) Ensembl	Ensembl	842 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations