Transcript

runx1t1-205

ID

ZDB-TSCRIPT-120213-319

Name

runx1t1-205 Nomenclature History

Previous Names

runx1t1-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

runx1t1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000151521 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000151521.3|gene_biotype:protein_coding|ENSDARG00000003680.12 transcript_biotype:nonsense_mediated_decay gene_symbol:runx1t1 cdna chromosome:GRCz11:19:33732162:33765725:1
AGTCTGCGGGCTCCGGGAACAAGCGTGTTCAGGATAGCGC
GAGGCCCCAGCGGCCACACGTGCCCTCGTTAGTGCAGGGC
ATCCCTGGAAGCAGAGCAGAACGAGAGGCAGGTCTCCATC
TGTCTCTCTCAAGCTCTGAAAGCAGGAGGACAGGCTGCTC
CACTCTCCCGCTCGGACCTGGTGTTTGGGCCCCGGGGGTT
CCTGTGCCACCCCCGTGCCCCACGCAGAGCACAGAAAGGC
GCAAAGAGACTAAGGTTACCGGGACTTTGGCAGAAATAAG
GAAAGCAACCTGGATTCTGTGATAGCCAGATTGTCTCCAG
CATCCATGATGCCAGATCGCACTGAGAAGCGCTCCACCAT
GCCCGACTCACCTGCTGATGTGAAAACACAGTCCAGGTTA
ACTCCGCCCACCATGCCTCCTCCCCCCACCACACAGGGAG
CTCCCAGGACCAGCTCCTTCACCCCCACAGCATAACTCCA
CTCTAACCATTGAGGAATTCCACTCCAAACTGCAAGAAGC
GACCAACTTCCCACTCCGACCGTTTGTCATCCCGTTTCTG
AAGGCCAATCTCCCGCTACTGCAGAGGGAACTGGTGCACT
GTGCACGGCTGGCCAAGCAGAACCCGGCTCAATACCTAGC
CCAACATGAGCAGCTCCTGCTGGACACAAGCACCACGTCG
CCTGTCGACTCGTCTGAACTCTTGATGGACGTCAACGAGA
ATGGCAAGAGAAGAACACCTGACAG

OTTDART00000054425 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000054425|OTTDARG00000014847|ZDB-GENE-060929-164 runx1t1|OTTDARP00000042753 runx1t1-002 LG_none CR759910.13,CR735113.6 Danio rerio protein_coding KNOWN, 745 bp
AGTCTGCGGGCTCCGGGAACAAGCGTGTTCAGGATAGCGC
GAGGCCCCAGCGGCCACACGTGCCCTCGTTAGTGCAGGGC
ATCCCTGGAAGCAGAGCAGAACGAGAGGCAGGTCTCCATC
TGTCTCTCTCAAGCTCTGAAAGCAGGAGGACAGGCTGCTC
CACTCTCCCGCTCGGACCTGGTGTTTGGGCCCCGGGGGTT
CCTGTGCCACCCCCGTGCCCCACGCAGAGCACAGAAAGGC
GCAAAGAGACTAAGGTTACCGGGACTTTGGCAGAAATAAG
GAAAGCAACCTGGATTCTGTGATAGCCAGATTGTCTCCAG
CATCCATGATGCCAGATCGCACTGAGAAGCGCTCCACCAT
GCCCGACTCACCTGCTGATGTGAAAACACAGTCCAGGTTA
ACTCCGCCCACCATGCCTCCTCCCCCCACCACACAGGGAG
CTCCCAGGACCAGCTCCTTCACCCCCACAGCATAACTCCA
CTCTAACCATTGAGGAATTCCACTCCAAACTGCAAGAAGC
GACCAACTTCCCACTCCGACCGTTTGTCATCCCGTTTCTG
AAGGCCAATCTCCCGCTACTGCAGAGGGAACTGGTGCACT
GTGCACGGCTGGCCAAGCAGAACCCGGCTCAATACCTAGC
CCAACATGAGCAGCTCCTGCTGGACACAAGCACCACGTCG
CCTGTCGACTCGTCTGAACTCTTGATGGACGTCAACGAGA
ATGGCAAGAGAAGAACACCTGACAG

Related Transcripts

Transcripts related to runx1t1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	runx1t1-205	Ensembl	745 nt
mRNA	runx1t1-201 (1) Ensembl	Ensembl	1,758 nt	Select Tool ZFIN BLAST
mRNA	runx1t1-202 (1) Ensembl	Ensembl	1,305 nt	Select Tool
mRNA	runx1t1-203 (1) Ensembl	Ensembl	5,244 nt	Select Tool
mRNA	runx1t1-204 (1) Ensembl	Ensembl	632 nt	Select Tool
mRNA	runx1t1-206 (1) Ensembl	Ensembl	2,360 nt	Select Tool ZFIN BLAST
mRNA	runx1t1-207 (1) Ensembl	Ensembl	1,847 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations