Transcript

stx8-202

ID

ZDB-TSCRIPT-120213-1106

Name

stx8-202 Nomenclature History

Previous Names

stx8-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

stx8 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000168031 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000168031.2|gene_biotype:protein_coding|ENSDARG00000103173.2 transcript_biotype:nonsense_mediated_decay gene_symbol:stx8 cdna chromosome:GRCz11:6:19790200:19802529:1
AGATAATCGATGACCTCGCTCAGCTTGTGGACAAGACGGA
CGGCCGCATCAAAAACGAGACAAAAAGAGTCAAGCTGTTG
GATAGCAAGTCTGCTTCCTGTGAGAAGTCTGCAGAAGTGA
AGGGATTTAAAGCCACTGCCTGTAAATGGCAAAGTCAGAT
CTGAACATTATGGTCAGTCTCAGTGCTCTCACAGGCCCAT
CTGCATGTGATCTGTGAGTTTGTTATTGGAGCGGCACTAA
AGGCATGATGGTGGTGATTGTTCTTCTTCTAATCGCCATC
ATTGTTGTGGCCTGTTGGCAGTAATGAAGAAGATGAAGAT
GCCACAGATATGAACTATAGAGACTTTCTGTCTGTATATA
GTGGTGAGTGATGGATTCACGCAGTATCCGAACAGACTGG
ACATGTAATCACATCTCTGCACACAGCTCTCTTTTTTCTC
GTACAGTAATGGAACACATAACTGGGTTAAAGCCAAGAAA
TGGACCACTATGAAGAACTGAATTCTTAGCTCCACAGATA
ACGATCAAAGTAGGATTCGGAATGGAAAGAAAAATAGAAA
AGAGCTTTGAAAGGTTTTGAATATTATTATGAATAAAACC
ATGAGCCCAAGATGCTCCAAGGGGGGAAACTATTTAAATT
CTTTGTTTGGCAGTGAAGAAAATGATCCGTATCCATCGTG
TAAACAGGGACTGAGTCACAAAGCAATACCGAGTTTTGAG
CTCTACTGTTGGGGTAAATAGAAAAGCTCTCATCCTCTTT
TTTCCTAATCCATTCAACTGCATTAAGAGAGAGAGAAAAA
AAAAACTTGTTTGGTAAAAAATAAT

OTTDART00000054522 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000054522|OTTDARG00000027243|ZDB-GENE-040426-1360 stx8|OTTDARP00000042828 stx8-002 LG_none CU929170.9,CU972509.4,CU019554.5,BX255899.5 Danio rerio protein_coding KNOWN, 825 bp
AGATAATCGATGACCTCGCTCAGCTTGTGGACAAGACGGA
CGGCCGCATCAAAAACGAGACAAAAAGAGTCAAGCTGTTG
GATAGCAAGTCTGCTTCCTGTGAGAAGTCTGCAGAAGTGA
AGGGATTTAAAGCCACTGCCTGTAAATGGCAAAGTCAGAT
CTGAACATTATGGTCAGTCTCAGTGCTCTCACAGGCCCAT
CTGCATGTGATCTGTGAGTTTGTTATTGGAGCGGCACTAA
AGGCATGATGGTGGTGATTGTTCTTCTTCTAATCGCCATC
ATTGTTGTGGCCTGTTGGCAGTAATGAAGAAGATGAAGAT
GCCACAGATATGAACTATAGAGACTTTCTGTCTGTATATA
GTGGTGAGTGATGGATTCACGCAGTATCCGAACAGACTGG
ACATGTAATCACATCTCTGCACACAGCTCTCTTTTTTCTC
GTACAGTAATGGAACACATAACTGGGTTAAAGCCAAGAAA
TGGACCACTATGAAGAACTGAATTCTTAGCTCCACAGATA
ACGATCAAAGTAGGATTCGGAATGGAAAGAAAAATAGAAA
AGAGCTTTGAAAGGTTTTGAATATTATTATGAATAAAACC
ATGAGCCCAAGATGCTCCAAGGGGGGAAACTATTTAAATT
CTTTGTTTGGCAGTGAAGAAAATGATCCGTATCCATCGTG
TAAACAGGGACTGAGTCACAAAGCAATACCGAGTTTTGAG
CTCTACTGTTGGGGTAAATAGAAAAGCTCTCATCCTCTTT
TTTCCTAATCCATTCAACTGCATTAAGAGAGAGAGAAAAA
AAAAACTTGTTTGGTAAAAAATAAT

Related Transcripts

Transcripts related to stx8

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
aberrant processed transcript	stx8-202	Ensembl		825 nt
mRNA	stx8-201 (1) Ensembl	Ensembl		1,365 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations