Transcript

tdo2a-204

ID

ZDB-TSCRIPT-110912-598

Name

tdo2a-204 Nomenclature History

Previous Names

tdo2a-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

tdo2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000150564 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000150564.3|gene_biotype:protein_coding|ENSDARG00000071429.8 transcript_biotype:nonsense_mediated_decay gene_symbol:tdo2a cdna chromosome:GRCz11:14:36738067:36747962:1
ACAACAGTCTTGATTGTCATTTATTCACATTTCAGCCATG
AGCGGATGTCCGTATTTTCAGAGGAAATTCTTGTCAACTA
GTAAGCAGCATCTGAAAGAAGAGGAGAATGATGAAGCTCA
GACTGGAATTAACAAAGCCAGCAAAGGAGGTCTGATCTAT
GGAGACTATCTGCAGCACCACAAGATTCTTCTTCGGTTTT
CAAATTAATTAACATTAGAGACTCTGGATAAAATAGTGAC
ATCTCAGGTGCTTCAAAGTGAGCTGAAGGGAAACAAGATC
CATGACGAACATCTGTTCATCGTCACACATCAAGCATATG
AACTGTGGTTTAAGCAGGTTTTGTGGGAGCTGGACTCAGT
CAGAGAAATCTTCATTAGCGGACATGTACGAGACGAGCGA
AACATGCTCAAAGTCAACACTCGCATACACAGGATTGTGA
TGATATTTCGACTGTTGCTTGACCAGTTCGCTGTTCTGGA
AACCATGACGGCCTTAGACTTCTATGACTTCAGGGAGTAT
CTCTCACCAGCTTCAGGCTTCCAGAGTTTGCAGTTTCGAC
TGCTGGAGAACAAGATTGGGGTCCCGCACAACCAGAGGGT
GCCGTACAACAGAAGGCATTACAGGGACAATTTCCGAGAC
CAGGAGAGTGAGCTGCTCCTCCACTCAGAGCAGGAGCCCA
CGCTGCTTCAGTTAGTAGAGCAATGGCTAGAGAGAACGCC
AGGCTTGGAGGAAGATGGCTTCAATTTTTGGGGGAAGCTG
GAAAAAAATATCTTTGAGGGGCTCAGGAGAGAGAAAGAAC
ATATTGAGCAAAAACCAGCCTCGGAGAGGAAGGAGGAGAT
GCTGGCCGAGCTCATTAAGCAGAGGGACATTTTCTTATCG
CTCTTTGATGAA

OTTDART00000029275 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000029275|OTTDARG00000028044|ZDB-GENE-030131-1187 tdo2a|OTTDARP00000040816 tdo2a-002 LG_ CR931784.8 Danio rerio protein_coding KNOWN, 892 bp
ACAACAGTCTTGATTGTCATTTATTCACATTTCAGCCATG
AGCGGATGTCCGTATTTTCAGAGGAAATTCTTGTCAACTA
GTAAGCAGCATCTGAAAGAAGAGGAGAATGATGAAGCTCA
GACTGGAATTAACAAAGCCAGCAAAGGAGGTCTGATCTAT
GGAGACTATCTGCAGCACCACAAGATTCTTCTTCGGTTTT
CAAATTAATTAACATTAGAGACTCTGGATAAAATAGTGAC
ATCTCAGGTGCTTCAAAGTGAGCTGAAGGGAAACAAGATC
CATGACGAACATCTGTTCATCGTCACACATCAAGCATATG
AACTGTGGTTTAAGCAGGTTTTGTGGGAGCTGGACTCAGT
CAGAGAAATCTTCATTAGCGGACATGTACGAGACGAGCGA
AACATGCTCAAAGTCAACACTCGCATACACAGGATTGTGA
TGATATTTCGACTGTTGCTTGACCAGTTCGCTGTTCTGGA
AACCATGACGGCCTTAGACTTCTATGACTTCAGGGAGTAT
CTCTCACCAGCTTCAGGCTTCCAGAGTTTGCAGTTTCGAC
TGCTGGAGAACAAGATTGGGGTCCCGCACAACCAGAGGGT
GCCGTACAACAGAAGGCATTACAGGGACAATTTCCGAGAC
CAGGAGAGTGAGCTGCTCCTCCACTCAGAGCAGGAGCCCA
CGCTGCTTCAGTTAGTAGAGCAATGGCTAGAGAGAACGCC
AGGCTTGGAGGAAGATGGCTTCAATTTTTGGGGGAAGCTG
GAAAAAAATATCTTTGAGGGGCTCAGGAGAGAGAAAGAAC
ATATTGAGCAAAAACCAGCCTCGGAGAGGAAGGAGGAGAT
GCTGGCCGAGCTCATTAAGCAGAGGGACATTTTCTTATCG
CTCTTTGATGAA

Related Transcripts

Transcripts related to tdo2a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	tdo2a-204	Ensembl	892 nt
mRNA	tdo2a-201 (1) Ensembl	Ensembl	1,552 nt	Select Tool
ncRNA	tdo2a-003 (1) Ensembl	Ensembl	747 nt	Select Tool
ncRNA	tdo2a-004 (1) Ensembl	Ensembl	965 nt	Select Tool
ncRNA	tdo2a-005 (1) Ensembl	Ensembl	720 nt	Select Tool
ncRNA	tdo2a-006 (1) Ensembl	Ensembl	1,442 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations