Transcript

cacnb2a-203

ID

ZDB-TSCRIPT-110325-783

Name

cacnb2a-203 Nomenclature History

Previous Names

cacnb2a-006

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

cacnb2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000167657 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000167657.2|gene_biotype:protein_coding|ENSDARG00000099045.2 transcript_biotype:nonsense_mediated_decay gene_symbol:cacnb2a cdna chromosome:GRCz11:7:71794235:71837213:-1
CACACACGGTCAGACAGATGTTCATAGACATGTACCTCTC
AACCAGCGAGGAGTCAGATTTGGGTTCAGCAGACTCATAC
ACCAGTCGGCCATCAGACTCGGATGTGTCTCTGGAGGAAG
ATAAAGAGACTTTACGCAGAGAAGCTGAGAGACAGGCTCA
GGCGCAACTCGACAAGGCCAAGAGTAAACCAGTGGCGTTT
GCAGTGCGCACTAATGTTGGCTACAGTGCTTCTTCTGAAG
ATGACGTCCCCGTGCCTGGAACGGGAATCTCATTTGATCC
TAAAGATTTCCTTCATGTTAAAGAAAAATTTAATAACGAC
TGGTGGATCGGCCGCTTGGTGAAGGAAGGCTGCGACATCG
GTTTCATCCCAAGTCCAGTGAAGCTGGAAAGCAGTCGCCT
TCGCCAGGAGCAGCGCGCAAAACAAGGACGCTTTTACTCA
AGTAAATCAGGGGCAAACTCTTCATCCAGTTTAGGGGACA
TTGTTTCAAACTCACGGAAATCAACTCCTCCCTCCTCAGC
TGTGGACATTGACGCCGCAGGTTTAGATGCAGAGGAGAGC
GATCCTCCTCCCCATCAGCGATCTCCCAAAGCCAGCCCAA
ACACAGTCATATCCCCTTTAGCCCGAGAGAAACGAATGCC
TTTCTTTAAGAAGCTAAGCAGTGGCAGAAGTCGACGGAGC
ATGCTCCTCCATATGATGTGGTGCCGTCGATGAGGCCGGT
TGTTCTCGTTGGACCTTCACTCAAGGGCTACGAGGTAACA
GATATGATGCAGAAAGCGCTGTTTGACTTTCTGAAGCACC
GGTTTGAGGGGAGGATAACCATCACAAGAGTGGCAGCTGA
TATCTCTCTGGCCAAACGCTCAGTACTGAACAACCCCAGT
AAACACGCCATCATCGAGCGCTCAAACACACGCTCCAATC
TAGCGGAGGTTCAGAGCGAGATCGAGAGGATATTTGAGCT
GGCCCGAACGCTGCAGCTGGTGGTTTTGGACGCCGACACA
ATAAACCATCCGTCACAGCTGGGGAAAACCTGTCTGGCAC
CCATCATTGTCTACATCAAGATCACCTCTCCAAAGGTTTT
GCAGAGATTAATCAAGTCCCGAGGAAAGTCTCAGGCCAAA
CATCTCAATGTACAGATGGTGGCAGCTGACAAACTGGCCC
AGTGCCCTTCAGAGCTCTTTGACATTATTCTAGATGAGAA
TCAGCTGGAAGACGCCTGTGAGCACATGGCCGACTATCTG
GAGCTATACTGGAAGTCCACTCATCCTCCCAGTGGCGCTC
CGTCCACTCCACTGCTGGACAAACTGAGCGCAGTGACCGC
AGCTGCAGTGGCCTGCAAAGAGCAGCTGACCAACACACAA
CCCAAGGGCACCGGCAGTGATGAGCATGCAGATCGAGCAG
CGGCCAACAGGACTAGCTTTTATGAAGACTATCATCACCA
TCATCATCCTCAACAGCAACACTACCAGACACAGAAGCAA
GAAAGCTTTGAAGAAGAAGAGGAAGAAGAAGATGATGATG
AAGAGAATACTGACCAAAGACACGACAACAGAGACCAACA
AAACCATCACAAAAACCAGCACTCTTCATCCACACGGACC
GAACGCCATCATCACCACCGCCACCACCACCATCATCATC
ATCACAGACACCATCATAGTCGCACCGCCAGAACACTGTC
CAAACAGGAGACACTAGAGTCCACTGAAACCCAGACACAC
TCGCAACCGCAGCAGGAGGAGGAGCAGGAGTCTGTTCAAC
CCAACCATCATCGTCATCACCACCATCACCATCGTCATCA
TCACCGTAATGAGAAAGAGAAGGAATACGATCACAACGAG
AGGAACAGCCGGCAAAGAGGAAAGCAGAAATCACAACGAG
AACACCACCATCATCACGAGAGGAGAAAACATTATATAGA
ACAATGACA

OTTDART00000050654 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000050654|OTTDARG00000035580|ZDB-GENE-080808-7 cacnb2a|OTTDARP00000039774 cacnb2a-006 LG_ CU607104.20 Danio rerio protein_coding KNOWN, 1929 bp
CACACACGGTCAGACAGATGTTCATAGACATGTACCTCTC
AACCAGCGAGGAGTCAGATTTGGGTTCAGCAGACTCATAC
ACCAGTCGGCCATCAGACTCGGATGTGTCTCTGGAGGAAG
ATAAAGAGACTTTACGCAGAGAAGCTGAGAGACAGGCTCA
GGCGCAACTCGACAAGGCCAAGAGTAAACCAGTGGCGTTT
GCAGTGCGCACTAATGTTGGCTACAGTGCTTCTTCTGAAG
ATGACGTCCCCGTGCCTGGAACGGGAATCTCATTTGATCC
TAAAGATTTCCTTCATGTTAAAGAAAAATTTAATAACGAC
TGGTGGATCGGCCGCTTGGTGAAGGAAGGCTGCGACATCG
GTTTCATCCCAAGTCCAGTGAAGCTGGAAAGCAGTCGCCT
TCGCCAGGAGCAGCGCGCAAAACAAGGACGCTTTTACTCA
AGTAAATCAGGGGCAAACTCTTCATCCAGTTTAGGGGACA
TTGTTTCAAACTCACGGAAATCAACTCCTCCCTCCTCAGC
TGTGGACATTGACGCCGCAGGTTTAGATGCAGAGGAGAGC
GATCCTCCTCCCCATCAGCGATCTCCCAAAGCCAGCCCAA
ACACAGTCATATCCCCTTTAGCCCGAGAGAAACGAATGCC
TTTCTTTAAGAAGCTAAGCAGTGGCAGAAGTCGACGGAGC
ATGCTCCTCCATATGATGTGGTGCCGTCGATGAGGCCGGT
TGTTCTCGTTGGACCTTCACTCAAGGGCTACGAGGTAACA
GATATGATGCAGAAAGCGCTGTTTGACTTTCTGAAGCACC
GGTTTGAGGGGAGGATAACCATCACAAGAGTGGCAGCTGA
TATCTCTCTGGCCAAACGCTCAGTACTGAACAACCCCAGT
AAACACGCCATCATCGAGCGCTCAAACACACGCTCCAATC
TAGCGGAGGTTCAGAGCGAGATCGAGAGGATATTTGAGCT
GGCCCGAACGCTGCAGCTGGTGGTTTTGGACGCCGACACA
ATAAACCATCCGTCACAGCTGGGGAAAACCTGTCTGGCAC
CCATCATTGTCTACATCAAGATCACCTCTCCAAAGGTTTT
GCAGAGATTAATCAAGTCCCGAGGAAAGTCTCAGGCCAAA
CATCTCAATGTACAGATGGTGGCAGCTGACAAACTGGCCC
AGTGCCCTTCAGAGCTCTTTGACATTATTCTAGATGAGAA
TCAGCTGGAAGACGCCTGTGAGCACATGGCCGACTATCTG
GAGCTATACTGGAAGTCCACTCATCCTCCCAGTGGCGCTC
CGTCCACTCCACTGCTGGACAAACTGAGCGCAGTGACCGC
AGCTGCAGTGGCCTGCAAAGAGCAGCTGACCAACACACAA
CCCAAGGGCACCGGCAGTGATGAGCATGCAGATCGAGCAG
CGGCCAACAGGACTAGCTTTTATGAAGACTATCATCACCA
TCATCATCCTCAACAGCAACACTACCAGACACAGAAGCAA
GAAAGCTTTGAAGAAGAAGAGGAAGAAGAAGATGATGATG
AAGAGAATACTGACCAAAGACACGACAACAGAGACCAACA
AAACCATCACAAAAACCAGCACTCTTCATCCACACGGACC
GAACGCCATCATCACCACCGCCACCACCACCATCATCATC
ATCACAGACACCATCATAGTCGCACCGCCAGAACACTGTC
CAAACAGGAGACACTAGAGTCCACTGAAACCCAGACACAC
TCGCAACCGCAGCAGGAGGAGGAGCAGGAGTCTGTTCAAC
CCAACCATCATCGTCATCACCACCATCACCATCGTCATCA
TCACCGTAATGAGAAAGAGAAGGAATACGATCACAACGAG
AGGAACAGCCGGCAAAGAGGAAAGCAGAAATCACAACGAG
AACACCACCATCATCACGAGAGGAGAAAACATTATATAGA
ACAATGACA

Related Transcripts

Transcripts related to cacnb2a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	cacnb2a-203	Ensembl	1,929 nt
aberrant processed transcript	cacnb2a-204 (1) Ensembl	Ensembl	2,207 nt	Select Tool
aberrant processed transcript	cacnb2a-207 (1) Ensembl	Ensembl	2,432 nt	Select Tool
aberrant processed transcript	cacnb2a-208 (1) Ensembl	Ensembl	2,206 nt	Select Tool
mRNA	cacnb2a-201 (1) Ensembl	Ensembl	1,943 nt	Select Tool
mRNA	cacnb2a-202 (1) Ensembl	Ensembl	1,795 nt	Select Tool
mRNA	cacnb2a-205 (1) Ensembl	Ensembl	1,909 nt	Select Tool
mRNA	cacnb2a-206 (1) Ensembl	Ensembl	4,132 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations