Transcript

snrpa1-201

ID
ZDB-TSCRIPT-110325-717
Name
snrpa1-201 Nomenclature History
Previous Names
  • snrpa1-001
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000102584 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000102584.5|gene_biotype:protein_coding|ENSDARG00000024651.8 transcript_biotype:nonsense_mediated_decay gene_symbol:snrpa1 cdna chromosome:GRCz11:7:9290965:9305581:1
AGATACTTCCGTTTGGCGGCAGCGTGTACGAATGTTACAC
GTTCACAATAAACTTTTGACCAAACACAGTTTTCTCCGCT
TAGACTAGTTTCTCTTGTTTTTCTTTGGTCTCTGCGGCGG
ACATGGTGAAGCTGACGGCGGAGTTGATCGAGCAGGCGGC
GCAGTACACGAACCCTGTGCGGGACAGAGAGCTGGATCTG
CGCGGCTATAAAATCCCTGTGCTAGAGAATCTGGGCGCCA
CTCTGGATCAGTTTGATACCATCGATCTGTCGGATAATGA
GGTCAGAAAACTGGATGGGTTTCCGCTGCTGAAGAGACTC
AAAACGCTGCTGGTGAACAACAACAGAATCTGCCGAATTG
GAGAGAACTTGGAGCAGGCTTTACCAGACCTGAAGGAGCT
CATTCTCACAAGCAACAACATTCAAGAGCTGGGTGATTTG
GATCCTCTTGCCACAGTAAAATCTTTGAGTCTGCTCAGTC
TCCTCAGGAATCCAGTTACCAACAAGAAACATTACAGATT
ATATGTCATCAATAAAATTCCACAGATCCGAGTTCTGGAC
TTCCAGAAGGTCAAACTGAAGGTTCACTCCTGGAGCTGGA
CTGCAAACCGAGAAGAAAACAGGCCCGTCTGCTGCCGAGG
TTGAAGCCATCAAGAATGCTATCGCTAATGCTACGTCACT
GGCTGAAGTGGAGCGGCTGAAGGGACTCCTGCAGGCTGGA
CAGATTCCAGGACGAGACCTCAGATCAGGAGCAGGGAACA
TGGTGGAGGAGGAAGAAGAGGAGGAGATGTCTGAGTCTGT
GCCCATGTTTGAGGACATGCAGGGAGAAAACAATGATGAA
GACATGCAGGAGGAAATGCATGTGAATGGATCGTAGTTCT
GTTCGGTTGTTGATGTTTCAGAATCATTTAATGCCGTTTT
GATGCTGTATTTGACAGCACTTGTTTTCAGAAGTGTTGCT
TTGTTTGTAAATTTAAAGTACATTAAACATTTTTTTATGA
A

OTTDART00000050336 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000050336|OTTDARG00000035378|ZDB-GENE-041114-82 snrpa1|OTTDARP00000039511 snrpa1-001 LG_ CU856378.10 Danio rerio protein_coding KNOWN, 1001 bp
AGATACTTCCGTTTGGCGGCAGCGTGTACGAATGTTACAC
GTTCACAATAAACTTTTGACCAAACACAGTTTTCTCCGCT
TAGACTAGTTTCTCTTGTTTTTCTTTGGTCTCTGCGGCGG
ACATGGTGAAGCTGACGGCGGAGTTGATCGAGCAGGCGGC
GCAGTACACGAACCCTGTGCGGGACAGAGAGCTGGATCTG
CGCGGCTATAAAATCCCTGTGCTAGAGAATCTGGGCGCCA
CTCTGGATCAGTTTGATACCATCGATCTGTCGGATAATGA
GGTCAGAAAACTGGATGGGTTTCCGCTGCTGAAGAGACTC
AAAACGCTGCTGGTGAACAACAACAGAATCTGCCGAATTG
GAGAGAACTTGGAGCAGGCTTTACCAGACCTGAAGGAGCT
CATTCTCACAAGCAACAACATTCAAGAGCTGGGTGATTTG
GATCCTCTTGCCACAGTAAAATCTTTGAGTCTGCTCAGTC
TCCTCAGGAATCCAGTTACCAACAAGAAACATTACAGATT
ATATGTCATCAATAAAATTCCACAGATCCGAGTTCTGGAC
TTCCAGAAGGTCAAACTGAAGGTTCACTCCTGGAGCTGGA
CTGCAAACCGAGAAGAAAACAGGCCCGTCTGCTGCCGAGG
TTGAAGCCATCAAGAATGCTATCGCTAATGCTACGTCACT
GGCTGAAGTGGAGCGGCTGAAGGGACTCCTGCAGGCTGGA
CAGATTCCAGGACGAGACCTCAGATCAGGAGCAGGGAACA
TGGTGGAGGAGGAAGAAGAGGAGGAGATGTCTGAGTCTGT
GCCCATGTTTGAGGACATGCAGGGAGAAAACAATGATGAA
GACATGCAGGAGGAAATGCATGTGAATGGATCGTAGTTCT
GTTCGGTTGTTGATGTTTCAGAATCATTTAATGCCGTTTT
GATGCTGTATTTGACAGCACTTGTTTTCAGAAGTGTTGCT
TTGTTTGTAAATTTAAAGTACATTAAACATTTTTTTATGA
A

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations