Transcript

cacnb4b-203

ID
ZDB-TSCRIPT-110325-388
Name
cacnb4b-203 Nomenclature History
Previous Names
  • cacnb4b-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000122023 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000122023.3|gene_biotype:protein_coding|ENSDARG00000062174.10 transcript_biotype:nonsense_mediated_decay gene_symbol:cacnb4b cdna chromosome:GRCz11:6:14086688:14146979:-1
CAGCACTCAACCCACATCACCGAAGCTGGAGCAAGCCGTC
CGAAACCCTCCAAACTTCCACTGGGCCGGGCCAGCAGGCC
AGCAACCCCCGATCTGGACCGATGTGCTGGCCGAGATGTC
TCGACACATTTATATTAGGAATAAGATCGGCGAGGGAATC
CAAGCACCTATATTTCAGGTGAACAGGGGAACATATTCAC
GACGCAGTCGGCTGAAGAGATCTGATGGCAGCACCACCTC
CACCAGTTTCATCCTCAGACAGGGTTCAGCTGATTCCTAC
ACTAGCAGGCCGTCTGATTCAGATGTGTCGTTGGAGGAGG
AGAGGCCGGAGGGGGGCAGTCAGGGCCGGCAGGAGCGAGA
ACAGCAGGCTCAATTACAGCTGGAGAGGGCAAAGGCCAAA
GCGGTGGCCTTCGCCGTGAAGACAAATGTCAGCTACTGTG
GTGCGCTGGATGAAGATGTGCCTGTGCCAGGAACCGCCAT
CTCATTCGATGCGAAAGACTTCCTGCACATCAAAGAGAAG
TTTAATAATGACTGGTGGATTGGGAGGCTGGTAAAAGAAG
GCTGTGAGATTGGCTTTATCCCCAGTCCCCTGAAGCTGGA
GAATATCAGAGCACAGCTGGAACAGAAGAAAAGCAGAGTA
CAAGGGCAAGCAGAAACAGAAAGTGACTGAACATGTGGCT
CCCTATGATGTTGTGCCTTCCATGAGGCCTGTGGTTCTGG
TTGGTCCATCCCTGAAAGGATATGAGGTCACTGATATGAT
GCAGAAAGCTCTTTTTGACTTCTTAAAACACCGGTTTGAT
GGCAGGATAACTATCACACGTGTGACAGCAGACATCTCAC
TGGCGAAGAGATCAGTGCTTAACAATCCCAGCAAGAGAGC
CATTATTGAGCGCTCAAACACCAGATCCAGCCTTGCTGAG
GTACAGAGTGAGATTGAGCGTATATTTGAACTAGCTCGAT
CGCTCCAGCTGGTAGTGTTGGACGCAGACACCATCAACCA
TCCTGCTCAGCTGATGAAGACTTCACTAGCACCCATTATC
GTCCATGTCAAAGTGTCCTCGCCGAAGGTCCTCCAGAGGC
TCATCAAGTCCAGAGGAAAGTCGCAGAGTAAACACCTCAA
CGTACAGCTCGTAGCGGCTGACAAACTAGCGCAGTGTCCT
CCGGAGATGTTTGATATTATCTTGGATGAGAATCAGTTGG
AAGACGCCTGCGAGCATTTGGCGGAGTATCTGGAGGCATA
CTGGAAGGCCACACACACCTCCAGCAGTACCCCGCTCAAC
CCGCTGCTGGGCAGAAACCTTGGCCCAGCTGCCCTCGCCC
CGTACACTACATCTGCCATATCTGGCTTGCAGAATCAACA
GGGGCAAAAAACACGGCACGCCAACCACACCGGGGACCAC
TCCACCCCCAATGAACGGCGCAACTTGATGACCTCAGACG
AGAACTACCACAACGAACGGGCGCACAAGGGACGAAACCG
GGGCTCCTCTGGCTCGCAGCACGGTGGCAGCGGTAGAGAC
CACCACTACATGGAGGAGCAGCAGGGCTACCAGGACCCCT
ACCAGGACACCTACAAGCCCCACCGCAACCGCAGTTCCCC
GGGCAGCTACAGCCAGGACTCACGACACCGGCTCTGAGAA
GCTCCGGCCCGTGTCCTCCTCCAAGCCTGAGCCACCGAGC
CAAGATGGCTTCTGTCCAGAATTGTACACATCTTCCATTT
GGTTTTCGTTTCATTAGGGTCTCCTGAGCTACAAAGCAGA
AACTTTGTTTTTAACCCCTCCCGAACCTGTACCATCTGAC
CGAAGCCTGCACATCCACAAGCTTAACACAAGGCTCTCTG
GGAAAAGGAGACCATTCGACATGCAATGCAGCAGAAACTT
GACACTTGTTATGTTTTCACTTGTTAATATGCTTGTTGAT
TTTTGGTTTGGTCAATTCTGTTGCAAAAGGGCAGGTTTTC
CTTCTACCAAGCAGCTGTTTTACTTTCAGATGGAATGGAA
TGATTGCTTGGCCCTAAAAAGCGAACGTTCTGTGAAGCTA
GATTCAGCAGAGAATCAGAAAGTATATACTGAATAAGGAG
CTCATTTAGTCTTTGTTTGCCAGCATGTTACCTGACCGCA
TGCTTCCCCCTGTCATTAGTGCATAACTTGAGCGGAAAGA
CCAGAAGATGACGCGCTGTGATCATTGCCCCAAGAAAAAT
GGCTGCCAAACTGGAACATTTCAATCCTAACGTAACACAA
ACCTACTGCCAGCTGTCTTTTGTTACAGAAATGGAATCTT
AATACCTTGATCTTGGAGTTTTCCGATCTCATGCGACTGA
ATTTCCACATTATTTGAGCAGTAAATAGCAGGAATCCTAG
ATTCAGCCACTTTAGCATGATGCACTGCATTCTAGCACTC
ATTCGTTCTTTTTCTAGTTAGGAAGACAGCTTAAAGAGAA
CATTGGAATGCTGAACTAAAGTGTCGCCGTGATCTAGTCC
TCAGTAGAGTTAGCAAGCGTTCACAAGATTCATTTTCATT
TGAAAGCTGAAATTGGAGCATTTGGGTAATTAGTTTACTT
AAAAAAAGAGCATTTTCCTAAATGTAACTCTGGGATGGAC
AGGTTTATTTGAATCTTTGGAAGATGACTGGCTGCCTGTG
CTCCACCCTGCCAACCGAGGCCAACGCCGTCCGGTCTACT
TCAGTAGATACACAGTGCCCTCCTCAGTGGCTCAAATGCT
ACAGACTCAACCCACCAAGTTGTCGTTCTTCTGCTCGTAT
GTTTTCAGCGTAAATAGGACAGTCCGAGGACAAGTAGATC
CTCAAAAAGTGGAAGCTTTCAGACCCAAGGCCTTGGCACA
CCATGGATTTCCTCGCCTGCATATTCCTGCCTTATTGATT
TATGCTAGTTTGTGCATTTTCAGAAGAATACATTTAAAAG
AAAAAACAAACTGAGGACCGCATTCTGTATGCATTTGTCT
ATGAGCATGCTTCTCTGTTAATTATATAATGAGGATGAAT
GAACATGAGGAATCTGGCAGTCGATGCCCATTTGACTA

OTTDART00000049037 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000049037|OTTDARG00000022129|ZDB-GENE-060421-7907 cacnb4b|OTTDARP00000038479 cacnb4b-002 LG_none BX323042.7,BX072556.9 Danio rerio protein_coding KNOWN, 3038 bp
CAGCACTCAACCCACATCACCGAAGCTGGAGCAAGCCGTC
CGAAACCCTCCAAACTTCCACTGGGCCGGGCCAGCAGGCC
AGCAACCCCCGATCTGGACCGATGTGCTGGCCGAGATGTC
TCGACACATTTATATTAGGAATAAGATCGGCGAGGGAATC
CAAGCACCTATATTTCAGGTGAACAGGGGAACATATTCAC
GACGCAGTCGGCTGAAGAGATCTGATGGCAGCACCACCTC
CACCAGTTTCATCCTCAGACAGGGTTCAGCTGATTCCTAC
ACTAGCAGGCCGTCTGATTCAGATGTGTCGTTGGAGGAGG
AGAGGCCGGAGGGGGGCAGTCAGGGCCGGCAGGAGCGAGA
ACAGCAGGCTCAATTACAGCTGGAGAGGGCAAAGGCCAAA
GCGGTGGCCTTCGCCGTGAAGACAAATGTCAGCTACTGTG
GTGCGCTGGATGAAGATGTGCCTGTGCCAGGAACCGCCAT
CTCATTCGATGCGAAAGACTTCCTGCACATCAAAGAGAAG
TTTAATAATGACTGGTGGATTGGGAGGCTGGTAAAAGAAG
GCTGTGAGATTGGCTTTATCCCCAGTCCCCTGAAGCTGGA
GAATATCAGAGCACAGCTGGAACAGAAGAAAAGCAGAGTA
CAAGGGCAAGCAGAAACAGAAAGTGACTGAACATGTGGCT
CCCTATGATGTTGTGCCTTCCATGAGGCCTGTGGTTCTGG
TTGGTCCATCCCTGAAAGGATATGAGGTCACTGATATGAT
GCAGAAAGCTCTTTTTGACTTCTTAAAACACCGGTTTGAT
GGCAGGATAACTATCACACGTGTGACAGCAGACATCTCAC
TGGCGAAGAGATCAGTGCTTAACAATCCCAGCAAGAGAGC
CATTATTGAGCGCTCAAACACCAGATCCAGCCTTGCTGAG
GTACAGAGTGAGATTGAGCGTATATTTGAACTAGCTCGAT
CGCTCCAGCTGGTAGTGTTGGACGCAGACACCATCAACCA
TCCTGCTCAGCTGATGAAGACTTCACTAGCACCCATTATC
GTCCATGTCAAAGTGTCCTCGCCGAAGGTCCTCCAGAGGC
TCATCAAGTCCAGAGGAAAGTCGCAGAGTAAACACCTCAA
CGTACAGCTCGTAGCGGCTGACAAACTAGCGCAGTGTCCT
CCGGAGATGTTTGATATTATCTTGGATGAGAATCAGTTGG
AAGACGCCTGCGAGCATTTGGCGGAGTATCTGGAGGCATA
CTGGAAGGCCACACACACCTCCAGCAGTACCCCGCTCAAC
CCGCTGCTGGGCAGAAACCTTGGCCCAGCTGCCCTCGCCC
CGTACACTACATCTGCCATATCTGGCTTGCAGAATCAACA
GGGGCAAAAAACACGGCACGCCAACCACACCGGGGACCAC
TCCACCCCCAATGAACGGCGCAACTTGATGACCTCAGACG
AGAACTACCACAACGAACGGGCGCACAAGGGACGAAACCG
GGGCTCCTCTGGCTCGCAGCACGGTGGCAGCGGTAGAGAC
CACCACTACATGGAGGAGCAGCAGGGCTACCAGGACCCCT
ACCAGGACACCTACAAGCCCCACCGCAACCGCAGTTCCCC
GGGCAGCTACAGCCAGGACTCACGACACCGGCTCTGAGAA
GCTCCGGCCCGTGTCCTCCTCCAAGCCTGAGCCACCGAGC
CAAGATGGCTTCTGTCCAGAATTGTACACATCTTCCATTT
GGTTTTCGTTTCATTAGGGTCTCCTGAGCTACAAAGCAGA
AACTTTGTTTTTAACCCCTCCCGAACCTGTACCATCTGAC
CGAAGCCTGCACATCCACAAGCTTAACACAAGGCTCTCTG
GGAAAAGGAGACCATTCGACATGCAATGCAGCAGAAACTT
GACACTTGTTATGTTTTCACTTGTTAATATGCTTGTTGAT
TTTTGGTTTGGTCAATTCTGTTGCAAAAGGGCAGGTTTTC
CTTCTACCAAGCAGCTGTTTTACTTTCAGATGGAATGGAA
TGATTGCTTGGCCCTAAAAAGCGAACGTTCTGTGAAGCTA
GATTCAGCAGAGAATCAGAAAGTATATACTGAATAAGGAG
CTCATTTAGTCTTTGTTTGCCAGCATGTTACCTGACCGCA
TGCTTCCCCCTGTCATTAGTGCATAACTTGAGCGGAAAGA
CCAGAAGATGACGCGCTGTGATCATTGCCCCAAGAAAAAT
GGCTGCCAAACTGGAACATTTCAATCCTAACGTAACACAA
ACCTACTGCCAGCTGTCTTTTGTTACAGAAATGGAATCTT
AATACCTTGATCTTGGAGTTTTCCGATCTCATGCGACTGA
ATTTCCACATTATTTGAGCAGTAAATAGCAGGAATCCTAG
ATTCAGCCACTTTAGCATGATGCACTGCATTCTAGCACTC
ATTCGTTCTTTTTCTAGTTAGGAAGACAGCTTAAAGAGAA
CATTGGAATGCTGAACTAAAGTGTCGCCGTGATCTAGTCC
TCAGTAGAGTTAGCAAGCGTTCACAAGATTCATTTTCATT
TGAAAGCTGAAATTGGAGCATTTGGGTAATTAGTTTACTT
AAAAAAAGAGCATTTTCCTAAATGTAACTCTGGGATGGAC
AGGTTTATTTGAATCTTTGGAAGATGACTGGCTGCCTGTG
CTCCACCCTGCCAACCGAGGCCAACGCCGTCCGGTCTACT
TCAGTAGATACACAGTGCCCTCCTCAGTGGCTCAAATGCT
ACAGACTCAACCCACCAAGTTGTCGTTCTTCTGCTCGTAT
GTTTTCAGCGTAAATAGGACAGTCCGAGGACAAGTAGATC
CTCAAAAAGTGGAAGCTTTCAGACCCAAGGCCTTGGCACA
CCATGGATTTCCTCGCCTGCATATTCCTGCCTTATTGATT
TATGCTAGTTTGTGCATTTTCAGAAGAATACATTTAAAAG
AAAAAACAAACTGAGGACCGCATTCTGTATGCATTTGTCT
ATGAGCATGCTTCTCTGTTAATTATATAATGAGGATGAAT
GAACATGAGGAATCTGGCAGTCGATGCCCATTTGACTA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations