Transcript

nt5c3a-204

ID

ZDB-TSCRIPT-110325-1962

Name

nt5c3a-204 Nomenclature History

Previous Names

nt5c3-003
nt5c3a-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

nt5c3a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000149935 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000149935.2|gene_biotype:protein_coding|ENSDARG00000058597.7 transcript_biotype:nonsense_mediated_decay gene_symbol:nt5c3a cdna chromosome:GRCz11:16:7219992:7228279:-1
TTTTCTTCTCTTTGACACAACGCCTGGAAGAGGAAAAGAT
GCCAGAGTTCGAGAAAAACACCGTTCACATCAGAGACCCT
GAGAGGGTGGAGCAGATTATCTGTGGTCTCATTAAAGGTG
GAGCTTCCAAACTGCAGATCATCACAGATTTCGATATGAC
GTTAAGCAGATTTGCCGTCAATGGAAAACGTTGTCCATCA
TGTCATAATATCATTGACAACTCAAAACTGGTGACAGACG
ATTGTAGGAAGAAGCTGGTCCACCTAAAGGAAACGTATTA
TCCCATAGAGATAGACCCTCATCTGACAATGGAGGAGAAA
TATCCATTTATGGTGGAGTGGTATTTTAAGTCTCACACAT
TATTGGTTGAACAGAGATTGGAAAAAGACAAACTTCCAGA
GGCCGTCAGAGAGTCGGACGGAAGGTTACGAGCAGTTCTT
TGACCGGCTGCATCAGCACAGCGTTCCCGTGTTCATCTTT
TCGGCGGGTCTGGGGGATGTGCTGGAGGAGATCATCAGAC
AAGCTGGCGTCTACCACCCCAACGTCAAAGTTGTGTCCAA
CTTCATGGACTTTGATGACAATGGGGTTCTGAAAGGCTTT
A

OTTDART00000048020 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000048020|OTTDARG00000034033|ZDB-GENE-030131-439 nt5c3a|OTTDARP00000037682 nt5c3-003 LG_ CU466278.13 Danio rerio protein_coding KNOWN, 601 bp
TTTTCTTCTCTTTGACACAACGCCTGGAAGAGGAAAAGAT
GCCAGAGTTCGAGAAAAACACCGTTCACATCAGAGACCCT
GAGAGGGTGGAGCAGATTATCTGTGGTCTCATTAAAGGTG
GAGCTTCCAAACTGCAGATCATCACAGATTTCGATATGAC
GTTAAGCAGATTTGCCGTCAATGGAAAACGTTGTCCATCA
TGTCATAATATCATTGACAACTCAAAACTGGTGACAGACG
ATTGTAGGAAGAAGCTGGTCCACCTAAAGGAAACGTATTA
TCCCATAGAGATAGACCCTCATCTGACAATGGAGGAGAAA
TATCCATTTATGGTGGAGTGGTATTTTAAGTCTCACACAT
TATTGGTTGAACAGAGATTGGAAAAAGACAAACTTCCAGA
GGCCGTCAGAGAGTCGGACGGAAGGTTACGAGCAGTTCTT
TGACCGGCTGCATCAGCACAGCGTTCCCGTGTTCATCTTT
TCGGCGGGTCTGGGGGATGTGCTGGAGGAGATCATCAGAC
AAGCTGGCGTCTACCACCCCAACGTCAAAGTTGTGTCCAA
CTTCATGGACTTTGATGACAATGGGGTTCTGAAAGGCTTT
A

Related Transcripts

Transcripts related to nt5c3a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	nt5c3a-204	Ensembl	601 nt
mRNA	nt5c3a-201 (1) Ensembl	Ensembl	1,256 nt	Select Tool
mRNA	nt5c3a-202 (1) Ensembl	Ensembl	853 nt	Select Tool
mRNA	nt5c3a-203 (1) Ensembl	Ensembl	1,826 nt	Select Tool
mRNA	nt5c3a-205 (1) Ensembl	Ensembl	4,285 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations