Transcript

znf532-202

ID

ZDB-TSCRIPT-091110-1750

Name

znf532-202 Nomenclature History

Previous Names

znf532-003
ch211-139n6.19-001
ottdart00000043620

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

znf532 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000139495 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000139495.3|gene_biotype:protein_coding|ENSDARG00000052894.7 transcript_biotype:nonsense_mediated_decay gene_symbol:znf532 cdna chromosome:GRCz11:21:10773513:10797512:1
CTAATGTCTGGATGACTCGTTTGGGGTGGACGCGGAAAGT
TTAAAGCCTCCTCCCAGGGTTTCTGCGTCAGGATCTGGGC
AGGTTTTGCTGTGCATGGCAGCAGCAAGAATCATGGCTGG
CCTTCTTGTCTTTGATATTTGCCTTTGCTGCCCTGCTGAG
ACGAAGAGCCCTCACATCCAAGCTTTTAATTGAGACACAG
CCCTTTCTTACAATAACCCACAGGTGTTAAGCTCATTTTC
ATGAGACCATGGGCGACATGAAAACCCCAGACTTTGATGA
TCTGCTTGCGGCCTTTGATATTCCTGATATGGTTGACCCC
AAGGCTGCCATTGAGTCTGGCCATGATGATCATGAGGGAC
AGCTCAAACACAATGCCCACCATGAAGAGGACTCCCATGC
CACCTCTGGTCCAGATGTCGGGCAGGGAGCCAAGGGAAGG
GAAACTCAACCACAGTGATCTCCGCGCCCTCTTCTGCCCC
AGTTGTTGCTGCCATGCCTCTTGATAAGGATGCCTCCAGG
GTCTGCAGATCGAATCTGAAGTGCTTGGAATGTAATGAGA
CGTTTCAGGAGGAGTCAGCTCTTGTAATGCACTACCAGCA
GGCTCCCGAGTCAAGTGGACAGGTGTGCTACCAGAACATC
TGACCAGTGAATTCAGCTTGTGTAATCAATCTAAACAAAA
ACAAAATTTAACAACCACCGACAGAGTAGTTGTGGAATAA
AAACAACACAGATTATTTTCCCTTGCACTTTCAAAGGAGG
CACCCCAAAGATACCAGATGTGCTTTTATTTTTATACT

OTTDART00000043620 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000043620|OTTDARG00000018943|ZDB-GENE-060531-40 znf532|OTTDARP00000034580 CH211-233A1.2-003 LG_ BX248399.5 Danio rerio protein_coding NOVEL, 798 bp
CTAATGTCTGGATGACTCGTTTGGGGTGGACGCGGAAAGT
TTAAAGCCTCCTCCCAGGGTTTCTGCGTCAGGATCTGGGC
AGGTTTTGCTGTGCATGGCAGCAGCAAGAATCATGGCTGG
CCTTCTTGTCTTTGATATTTGCCTTTGCTGCCCTGCTGAG
ACGAAGAGCCCTCACATCCAAGCTTTTAATTGAGACACAG
CCCTTTCTTACAATAACCCACAGGTGTTAAGCTCATTTTC
ATGAGACCATGGGCGACATGAAAACCCCAGACTTTGATGA
TCTGCTTGCGGCCTTTGATATTCCTGATATGGTTGACCCC
AAGGCTGCCATTGAGTCTGGCCATGATGATCATGAGGGAC
AGCTCAAACACAATGCCCACCATGAAGAGGACTCCCATGC
CACCTCTGGTCCAGATGTCGGGCAGGGAGCCAAGGGAAGG
GAAACTCAACCACAGTGATCTCCGCGCCCTCTTCTGCCCC
AGTTGTTGCTGCCATGCCTCTTGATAAGGATGCCTCCAGG
GTCTGCAGATCGAATCTGAAGTGCTTGGAATGTAATGAGA
CGTTTCAGGAGGAGTCAGCTCTTGTAATGCACTACCAGCA
GGCTCCCGAGTCAAGTGGACAGGTGTGCTACCAGAACATC
TGACCAGTGAATTCAGCTTGTGTAATCAATCTAAACAAAA
ACAAAATTTAACAACCACCGACAGAGTAGTTGTGGAATAA
AAACAACACAGATTATTTTCCCTTGCACTTTCAAAGGAGG
CACCCCAAAGATACCAGATGTGCTTTTATTTTTATACT

Related Transcripts

Transcripts related to znf532

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	znf532-202	Ensembl	798 nt
mRNA	znf532-201 (1) Ensembl	Ensembl	3,858 nt	Select Tool ZFIN BLAST
mRNA	znf532-203 (1) Ensembl	Ensembl	609 nt	Select Tool ZFIN BLAST
mRNA	znf532-204 (1) Ensembl	Ensembl	403 nt	Select Tool ZFIN BLAST
mRNA	znf532-205 (1) Ensembl	Ensembl	4,371 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations