Transcript

pitx2-201

ID
ZDB-TSCRIPT-090929-9526
Name
pitx2-201 Nomenclature History
Previous Names
  • pitx2-002
  • pitx2c (1)
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
This transcript is commonly referred to as the pitx2c splice variant.
Sequence
ENSDART00000052569 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000052569.7|gene_biotype:protein_coding|ENSDARG00000036194.9 transcript_biotype:protein_coding gene_symbol:pitx2 cdna chromosome:GRCz11:14:36226243:36229796:1
GATGTGCAGGAGAGTGTGTGTGTATGCAAGTGGATATAAT
ATCACATACCTGTCCCTGTCACTCTGGCTCTCCTTGCTCT
CGGCTGAAACCGAGATATCTTTTACCCAGTCGAAACGGGA
AAAAAATCTTTCCTTAACACTGGGCTTGTTTAATCATATT
TTTTTATTATTAAAGCCGTTTCAGGAGTGTCGCTTTTAGT
GGTTTAAATGAGAAAGGAGCACTGGCAACGCTTGCCGATA
CTTCACTGCTGGACACATTCGTTTCTTTCTTTCTTTTATT
TCTTTTATTTATTTATTTATCTGTATTTGTGACCTGCGCT
GAGGAAGTTATAGCTGCTTGCGAGCCGTCGGTAAATCGCT
TGTCTTATCCATGACCTCTATGAAGGATCCGTTGAGTTTG
GACCACCATCATCACAATCACCACGTTACCGGGAGTAAAC
ACGCGCCGCTTTCGATGGCCTCTAGTCTGCAACCGCTTCA
GCGGTCTGTGGACTCGAAACACAGGCTGGATGTGCACACG
GTTTCAGACACCTCCAGTCCAGAGTCCGTAGAGAAAGAAA
AGGGACAAAGTAAAAACGAAGATTCGAACGATGACCCGTC
GAAAAAGAAGAGACAAAGGCGGCAACGAACGCATTTTACT
AGCCAGCAGTTACAGGAACTGGAGGCCACTTTTCAGAGGA
ATCGCTATCCGGACATGTCGACTAGAGAGGAGATCGCCGT
TTGGACAAATTTAACAGAGGCCAGAGTCCGAGTGTGGTTC
AAGAATCGACGGGCAAAATGGAGAAAAAGGGAGAGGAATC
AACAGGCTGAGCTGTGTAAAAACGGTTTCGGCCCTCAATT
CAACGGACTTATGCAGCCCTACGATGACATGTATCCCAGC
TATACGTACAACAACTGGGCTGCAAAGGGACTCACGTCGG
CCTCTCTGTCTACCAAAAGCTTTCCTTTTTTCAATTCCAT
GAATGTCAATCCGCTGTCGTCCCAGACCATGTTCTCTCCA
CCTAACTCTATCTCTTCAATGAGCATGTCCTCCAGTATGG
TTCCGTCTGCTGTCACCGGTGTACCAGGATCAAGTTTAAA
CAGCCTCAATAACTTGAATAACCTCAGCAACCCCTCTCTA
AATTCGGGGGTTCCCACGCCGGCGTGCCCTTACGCCCCAC
CGACGCCTCCGTATGTTTACCGGGACACTTGTAACTCCAG
TCTTGCCAGTCTGAGACTGAAAGCCAAGCAACACTCGAGT
TTTGGATACGCGAGCGTGCAGAATCCGGCCTCCAATCTCA
GCGCCTGCCAGTACGCAGTGGATAGACCGGTGTAAGAGAC
GACTGTAGAATTTACAATCCGAATCCCAGGAACAAGAGAC
TTCACTTTTTGTTTCAATGGCACTAGAAGAATAAACCACT
GAAACGCGTCCAATCCTGTGATGGAATGTCAAGCGGGAAC
GGAAGGCAAAGGCTCCATTGCTAATAAGATTTGTTCTCTA
CACTAGCAAGTGCACACTAGCCAGTGAAGAGATTAGGATA
CCACAATATTTAACAACAAAAAAAATCTCATTTATTTTGA
CGTTTCAATTTTGGACAGTAATTGACTGAACGGTTGTATA
TAGGCTATACATATATCTTAATATCATCTCCAATTTGTAG
AAGCGAAAGCTCTAACTCTTAAGCATTTTCAAGAATTCAG
TTCAACACAGCATGTGGAAAACTTACAGGAATCATGTCTT
GCTTGCGATCAAGGGAATGTACATACTAAACGCACCAGTC
GTGTGTGATATTATAAATTTATTATTAAATGTCTGTGTGA
ATATAGATCTAGAATAGCAACCCTGGGTAATAATACGCAA
ATGTTTCTGCGAAATGAACTTGGTTTTTGCTCTGTGTATA
ATATTTGGTACGGAATTTTTGTTTCGTTTTTCAACATCCC
AAAAATAAACTATTGTGTTTTATTTAA

OTTDART00000026935 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000026935|OTTDARG00000021245|ZDB-GENE-990714-27 pitx2|OTTDARP00000022079 pitx2-002 LG_ BX511223.6 Danio rerio protein_coding KNOWN, 1947 bp
GATGTGCAGGAGAGTGTGTGTGTATGCAAGTGGATATAAT
ATCACATACCTGTCCCTGTCACTCTGGCTCTCCTTGCTCT
CGGCTGAAACCGAGATATCTTTTACCCAGTCGAAACGGGA
AAAAAATCTTTCCTTAACACTGGGCTTGTTTAATCATATT
TTTTTATTATTAAAGCCGTTTCAGGAGTGTCGCTTTTAGT
GGTTTAAATGAGAAAGGAGCACTGGCAACGCTTGCCGATA
CTTCACTGCTGGACACATTCGTTTCTTTCTTTCTTTTATT
TCTTTTATTTATTTATTTATCTGTATTTGTGACCTGCGCT
GAGGAAGTTATAGCTGCTTGCGAGCCGTCGGTAAATCGCT
TGTCTTATCCATGACCTCTATGAAGGATCCGTTGAGTTTG
GACCACCATCATCACAATCACCACGTTACCGGGAGTAAAC
ACGCGCCGCTTTCGATGGCCTCTAGTCTGCAACCGCTTCA
GCGGTCTGTGGACTCGAAACACAGGCTGGATGTGCACACG
GTTTCAGACACCTCCAGTCCAGAGTCCGTAGAGAAAGAAA
AGGGACAAAGTAAAAACGAAGATTCGAACGATGACCCGTC
GAAAAAGAAGAGACAAAGGCGGCAACGAACGCATTTTACT
AGCCAGCAGTTACAGGAACTGGAGGCCACTTTTCAGAGGA
ATCGCTATCCGGACATGTCGACTAGAGAGGAGATCGCCGT
TTGGACAAATTTAACAGAGGCCAGAGTCCGAGTGTGGTTC
AAGAATCGACGGGCAAAATGGAGAAAAAGGGAGAGGAATC
AACAGGCTGAGCTGTGTAAAAACGGTTTCGGCCCTCAATT
CAACGGACTTATGCAGCCCTACGATGACATGTATCCCAGC
TATACGTACAACAACTGGGCTGCAAAGGGACTCACGTCGG
CCTCTCTGTCTACCAAAAGCTTTCCTTTTTTCAATTCCAT
GAATGTCAATCCGCTGTCGTCCCAGACCATGTTCTCTCCA
CCTAACTCTATCTCTTCAATGAGCATGTCCTCCAGTATGG
TTCCGTCTGCTGTCACCGGTGTACCAGGATCAAGTTTAAA
CAGCCTCAATAACTTGAATAACCTCAGCAACCCCTCTCTA
AATTCGGGGGTTCCCACGCCGGCGTGCCCTTACGCCCCAC
CGACGCCTCCGTATGTTTACCGGGACACTTGTAACTCCAG
TCTTGCCAGTCTGAGACTGAAAGCCAAGCAACACTCGAGT
TTTGGATACGCGAGCGTGCAGAATCCGGCCTCCAATCTCA
GCGCCTGCCAGTACGCAGTGGATAGACCGGTGTAAGAGAC
GACTGTAGAATTTACAATCCGAATCCCAGGAACAAGAGAC
TTCACTTTTTGTTTCAATGGCACTAGAAGAATAAACCACT
GAAACGCGTCCAATCCTGTGATGGAATGTCAAGCGGGAAC
GGAAGGCAAAGGCTCCATTGCTAATAAGATTTGTTCTCTA
CACTAGCAAGTGCACACTAGCCAGTGAAGAGATTAGGATA
CCACAATATTTAACAACAAAAAAAATCTCATTTATTTTGA
CGTTTCAATTTTGGACAGTAATTGACTGAACGGTTGTATA
TAGGCTATACATATATCTTAATATCATCTCCAATTTGTAG
AAGCGAAAGCTCTAACTCTTAAGCATTTTCAAGAATTCAG
TTCAACACAGCATGTGGAAAACTTACAGGAATCATGTCTT
GCTTGCGATCAAGGGAATGTACATACTAAACGCACCAGTC
GTGTGTGATATTATAAATTTATTATTAAATGTCTGTGTGA
ATATAGATCTAGAATAGCAACCCTGGGTAATAATACGCAA
ATGTTTCTGCGAAATGAACTTGGTTTTTGCTCTGTGTATA
ATATTTGGTACGGAATTTTTGTTTCGTTTTTCAACATCCC
AAAAATAAACTATTGTGTTTTATTTAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations