Transcript

six4a-202

ID
ZDB-TSCRIPT-090929-8936
Name
six4a-202 Nomenclature History
Previous Names
  • six4.2-002
  • six4a-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000143903 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000143903.2|gene_biotype:protein_coding|ENSDARG00000004695.11 transcript_biotype:nonsense_mediated_decay gene_symbol:six4a cdna chromosome:GRCz11:13:31636732:31647006:-1
CCACTTACAAAGACACCCGATATCACTCGCATGGCGCACG
GGTAACCTGATCAGCTTGGGCAGAAACGAGGCGGGGTGAC
GGACTAAAGGAATCTGAGGTGAAGAACAAAAACAATGTCT
GTTTCCTCTAGTGAAGTGACAGTGCCAGGCGACATCAAAA
AGGAAAATGTGAAGTACACGGAGCTTCTCGAGAGCTCCAC
GGCCAATCAGGAGCACGTCAAACTCCTGACTCTGGACAGT
CCGGTGGCCACTGGGATGCGCGTGGGCCAGCAGACCTCTC
CACCGGCGCGCAAGATGCCAACTATGGACTCTTTGTTTGC
GCACAGTTCGCCCGCAGTAACCGCGACCTCTTTGGCTTTC
TCACCGGAGCAGGTTGCGTGTGTTTGCGAGGCGCTTCAGC
AGGGGGGCAACGTGGACCGACTCGCCCGTTTTCTGTGGTC
TCTCCCGCAGAGCGACTTATTGCGCGGTAACGAGAGTATC
CTCCGCGCTCAGGCACTCGTGGCTTTCCACCAGGCGCGCT
ACCAGGAGCTTTACAGCATCTTGGAGAGCCACAGCTTCAG
CCCCTCGTGTCACTCTGCCCTGCAGGACTTATGGTACAAA
GCCCGGTACACGGAGGCGGAGAAGGCCCGCGGTAGACCGC
TGGGAGCAGTAGATAAATATCGCCTCCGACGAAAGTTTCC
CCTACCCCGGACCATCTGGGATGGAGAGGAGACGGTGTAC
TGCTTCAAAGAGCGCTCCAGGAACGCGCTGAAGGATCTCT
ATAAGCAGAACCGGTACCCGTCCCCGGCCGAGAAGAGGAA
TCTGGCCAAGATCACAGGACTGTCCTTGACACAAGTCAGC
AACTGGTTCAAAAACAGGAGGCAGCGAGACAGAAACCCAT
CAGAGACGCAGTCCAAAAGGTGAGCGAGTCGGATGGAAAT
CACAGTACGGAGGATGAGAGCAGTAAAGGTCAGGAGTCTC
TCTCTCCATGCCCGATGTCCACCTGCGCTGATGGGCCAGT
GAGTAACACAGCTCTGCCTCTCTGCTCCGGCTCTCTGGAC
GCCGGAGTGATCGTCCAGCAGGTTGCAGACAGCAGGACCT
CTATCTCTCCACCCTCCGTCATCTTCAACGGAGTCTCAGT
TCACTCACCTGCCTCTGTTTTCCACAACGGCACCCCTTCA
TTTCTCTCCTCCACGGGACACGTCTTGTTCAGTGGCATGA
ATTTGGGACTCCAGTCTTTGGCTTGCAGACCTACAGATGT
GGAGATGGACGGTGCAGCACAGGAGAAAGGGGGAACGGCA
GACCCTGCACTGGCCTACTCTTCATTTCATTGCAGTGTCA
ATGGGACGGATGTAGAGGTGAAAGAAGAAGATTTGAGGAA
GGACGTTTCGGTGCAGGACCAAGCACCGTCTATTGGTTCA
GCATTCAGCATCACTCCATCTAATGGCTTGCAGATTGATA
GTTATAGTTTGGTTACTGAAGGAAACAAGGTTGTACTTCC
CTCCCTGCAACTCACAGTATCTTCTTCACCCTCATCAGTC
ACACAGGGTGTTGTTGACTGCAGTTCTCCAGTGTGTCAGG
AGCGGCTCCAGCTCACCTCTTTGGAGCCCAGCAGCACACT
CTACAGCCTGGGCAACATTCACACATTGTCTGCCGTCAAG
AAGGAGCCACTGGAGCCTCCTGGAGGATTCCTTTACCACC
TGGGTTACTCATCTGACCCCACGCACAGCTCGCCCTTACT
GGCCCAAACGGACCTGCCCACAGAGTTCAGAGGTCACACT
GACCACATGACCTCCAGCGTAAATGGAGACTTCCTATGTG
CTGTTTCTGAGGGAGGAAAGGGAGAAATGGAGGAAGAAGA
GGAAAAACAACTGACAAAACTAAAAACTGTGCATTTAGAG
GAAGAGATGACCGACCTTTGAACTTAAGAGGAGAAGAAGG
TAAAATACTGAAAATCATTATTTGGAAAACATTAACTCAA
ACATTATTTTGGATTATTGATTGAGATTTTTTATGTTTTC
AGACTCTTGTTTTGTGTATTGTAAAGTATTAAATTATTTT
GGTGAA

OTTDART00000026246 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000026246|OTTDARG00000020846|ZDB-GENE-010201-2 six4a|OTTDARP00000044339 six4a-002 LG_ BX537123.15 Danio rerio protein_coding KNOWN, 2046 bp
CCACTTACAAAGACACCCGATATCACTCGCATGGCGCACG
GGTAACCTGATCAGCTTGGGCAGAAACGAGGCGGGGTGAC
GGACTAAAGGAATCTGAGGTGAAGAACAAAAACAATGTCT
GTTTCCTCTAGTGAAGTGACAGTGCCAGGCGACATCAAAA
AGGAAAATGTGAAGTACACGGAGCTTCTCGAGAGCTCCAC
GGCCAATCAGGAGCACGTCAAACTCCTGACTCTGGACAGT
CCGGTGGCCACTGGGATGCGCGTGGGCCAGCAGACCTCTC
CACCGGCGCGCAAGATGCCAACTATGGACTCTTTGTTTGC
GCACAGTTCGCCCGCAGTAACCGCGACCTCTTTGGCTTTC
TCACCGGAGCAGGTTGCGTGTGTTTGCGAGGCGCTTCAGC
AGGGGGGCAACGTGGACCGACTCGCCCGTTTTCTGTGGTC
TCTCCCGCAGAGCGACTTATTGCGCGGTAACGAGAGTATC
CTCCGCGCTCAGGCACTCGTGGCTTTCCACCAGGCGCGCT
ACCAGGAGCTTTACAGCATCTTGGAGAGCCACAGCTTCAG
CCCCTCGTGTCACTCTGCCCTGCAGGACTTATGGTACAAA
GCCCGGTACACGGAGGCGGAGAAGGCCCGCGGTAGACCGC
TGGGAGCAGTAGATAAATATCGCCTCCGACGAAAGTTTCC
CCTACCCCGGACCATCTGGGATGGAGAGGAGACGGTGTAC
TGCTTCAAAGAGCGCTCCAGGAACGCGCTGAAGGATCTCT
ATAAGCAGAACCGGTACCCGTCCCCGGCCGAGAAGAGGAA
TCTGGCCAAGATCACAGGACTGTCCTTGACACAAGTCAGC
AACTGGTTCAAAAACAGGAGGCAGCGAGACAGAAACCCAT
CAGAGACGCAGTCCAAAAGGTGAGCGAGTCGGATGGAAAT
CACAGTACGGAGGATGAGAGCAGTAAAGGTCAGGAGTCTC
TCTCTCCATGCCCGATGTCCACCTGCGCTGATGGGCCAGT
GAGTAACACAGCTCTGCCTCTCTGCTCCGGCTCTCTGGAC
GCCGGAGTGATCGTCCAGCAGGTTGCAGACAGCAGGACCT
CTATCTCTCCACCCTCCGTCATCTTCAACGGAGTCTCAGT
TCACTCACCTGCCTCTGTTTTCCACAACGGCACCCCTTCA
TTTCTCTCCTCCACGGGACACGTCTTGTTCAGTGGCATGA
ATTTGGGACTCCAGTCTTTGGCTTGCAGACCTACAGATGT
GGAGATGGACGGTGCAGCACAGGAGAAAGGGGGAACGGCA
GACCCTGCACTGGCCTACTCTTCATTTCATTGCAGTGTCA
ATGGGACGGATGTAGAGGTGAAAGAAGAAGATTTGAGGAA
GGACGTTTCGGTGCAGGACCAAGCACCGTCTATTGGTTCA
GCATTCAGCATCACTCCATCTAATGGCTTGCAGATTGATA
GTTATAGTTTGGTTACTGAAGGAAACAAGGTTGTACTTCC
CTCCCTGCAACTCACAGTATCTTCTTCACCCTCATCAGTC
ACACAGGGTGTTGTTGACTGCAGTTCTCCAGTGTGTCAGG
AGCGGCTCCAGCTCACCTCTTTGGAGCCCAGCAGCACACT
CTACAGCCTGGGCAACATTCACACATTGTCTGCCGTCAAG
AAGGAGCCACTGGAGCCTCCTGGAGGATTCCTTTACCACC
TGGGTTACTCATCTGACCCCACGCACAGCTCGCCCTTACT
GGCCCAAACGGACCTGCCCACAGAGTTCAGAGGTCACACT
GACCACATGACCTCCAGCGTAAATGGAGACTTCCTATGTG
CTGTTTCTGAGGGAGGAAAGGGAGAAATGGAGGAAGAAGA
GGAAAAACAACTGACAAAACTAAAAACTGTGCATTTAGAG
GAAGAGATGACCGACCTTTGAACTTAAGAGGAGAAGAAGG
TAAAATACTGAAAATCATTATTTGGAAAACATTAACTCAA
ACATTATTTTGGATTATTGATTGAGATTTTTTATGTTTTC
AGACTCTTGTTTTGTGTATTGTAAAGTATTAAATTATTTT
GGTGAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations