Transcript

srsf2a-205

ID

ZDB-TSCRIPT-090929-8566

Name

srsf2a-205 Nomenclature History

Previous Names

sfrs2-004
srsf2-004
srsf2a-004

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

srsf2a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000140550 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000140550.2|gene_biotype:protein_coding|ENSDARG00000057484.8 transcript_biotype:nonsense_mediated_decay gene_symbol:srsf2a cdna chromosome:GRCz11:12:31721450:31723106:-1
AAGCAGGTCCCGCTACAGCCGATCCAGATCCCGGTCTTAC
TCTCGTTCCCGGTCTCGGTCCCGATCCCGCTCCAAAACCC
GCACCCCTCGCAGAAGCAAGTCAAAATCACCTTCCAGGTC
CCGCTCAAGGTCCAAGTCCAAATCTCACTCCAGGAGCCGC
ACCCCCAGATCGAACAAAGGATCCAAATCCAGGTCCAGAT
CAAGAAGCAGACCCAAGTCTCCAGAGGCTACTGATGACGC
TGCTGTTGAATCGTGAAATCTGCTGATTCCTGTTTGCAAA
AGAGGAGTTTGGGGCAGTTTGAGAGCAGTTAGTGTGTGAT
CCGACCATTGGCTGCCTGCTGCTGATTGGCGGTTGCTATG
GAGCAGGTCGGTCTCATTTGAGTGTTGAGGTGGTGTTGAG
ATGATGACTGGTTGAATCTTCAAGGATCGCAGTGAACAGA
TGTCCGTCTGAGGATACCCAAATTATCCATATATCAGACC
GAAAGGTTATTGTAATTTGGTCTACATCTTTTTAAATGAT
TTTGTTTCTCCTCTTTTGCCCACATTTTTGTATCAAACAC
ATTTCAT

OTTDART00000025860 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000025860|OTTDARG00000020615|ZDB-GENE-040426-2706 srsf2a|OTTDARP00000045904 sfrs2-004 LG_ CR352342.9 Danio rerio protein_coding KNOWN, 567 bp
AAGCAGGTCCCGCTACAGCCGATCCAGATCCCGGTCTTAC
TCTCGTTCCCGGTCTCGGTCCCGATCCCGCTCCAAAACCC
GCACCCCTCGCAGAAGCAAGTCAAAATCACCTTCCAGGTC
CCGCTCAAGGTCCAAGTCCAAATCTCACTCCAGGAGCCGC
ACCCCCAGATCGAACAAAGGATCCAAATCCAGGTCCAGAT
CAAGAAGCAGACCCAAGTCTCCAGAGGCTACTGATGACGC
TGCTGTTGAATCGTGAAATCTGCTGATTCCTGTTTGCAAA
AGAGGAGTTTGGGGCAGTTTGAGAGCAGTTAGTGTGTGAT
CCGACCATTGGCTGCCTGCTGCTGATTGGCGGTTGCTATG
GAGCAGGTCGGTCTCATTTGAGTGTTGAGGTGGTGTTGAG
ATGATGACTGGTTGAATCTTCAAGGATCGCAGTGAACAGA
TGTCCGTCTGAGGATACCCAAATTATCCATATATCAGACC
GAAAGGTTATTGTAATTTGGTCTACATCTTTTTAAATGAT
TTTGTTTCTCCTCTTTTGCCCACATTTTTGTATCAAACAC
ATTTCAT

Related Transcripts

Transcripts related to srsf2a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	srsf2a-202 (1) Ensembl	Ensembl	582 nt	Select Tool
aberrant processed transcript	srsf2a-205	Ensembl	567 nt
aberrant processed transcript	srsf2a-206 (1) Ensembl	Ensembl	603 nt	Select Tool
aberrant processed transcript	srsf2a-208 (1) Ensembl	Ensembl	908 nt	Select Tool
mRNA	srsf2a-201 (1) Ensembl	Ensembl	1,776 nt	Select Tool
mRNA	srsf2a-204 (1) Ensembl	Ensembl	1,151 nt	Select Tool
mRNA	srsf2a-207 (1) Ensembl	Ensembl	855 nt	Select Tool
mRNA	srsf2a-209 (1) Ensembl	Ensembl	707 nt	Select Tool
mRNA	srsf2a-211 (1) Ensembl	Ensembl	788 nt	Select Tool ZFIN BLAST
ncRNA	srsf2a-002 (1) Ensembl	Ensembl	1,024 nt	Select Tool
ncRNA	srsf2a-010 (1) Ensembl	Ensembl	636 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations