Transcript

ptch1-202

ID
ZDB-TSCRIPT-090929-8090
Name
ptch1-202 Nomenclature History
Previous Names
  • ptc2-001
  • ptch1-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000148258 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000148258.2|gene_biotype:protein_coding|ENSDARG00000016404.11 transcript_biotype:protein_coding gene_symbol:ptch1 cdna chromosome:GRCz11:8:29986265:30066179:1
TGGGTGGCAGGGTGAATCAGGAACTCAAGTACACACGGCA
GAAGATCGGAGAGGAGGCCATGTTTAGTCCTCAGCTCATG
ATACAGACGCCTCGTCAGGAAGGTGCTAACATTTTGACCG
TAGAGGCGCTAAAGCAGCACCTCGACTCTGCCATAAAGGC
CAGCAGAGTGCACGTTTACATGTACAACAGGCAATGGACA
TTGGAACATTTATGCTACAAATCAGGAGAACTTGTTACCG
AAACCAATGTTGTGGACCAGATCTTAGAAAAACTGCACCC
TTGTCTTGTCATCACTCCTCTGGACTGCTTCTGGGAAGGT
GCTAAGCTACATTCAGGAACATTCTATCTCCCTGGCAAAC
CCCCATTACAGTGGACCAACTTCGATCCGATGGGCTTCAT
TGCTGAGTTGAAGATGCTGAAGTATCAGGTGGACAGCTGG
GAGGAGATGCTGGTTAAAGCAGATGTGGGTCAAGGTTACA
TGAACCGGCCCTGCCTGAATCCTGCAGACCCCGACTGCCC
ATTATCAGCTCCCAACAAGAACACCACAGGGCCTTTTGAC
GTGGCTCCTGTTCTGACTGGTGGCTGCTATGGGCTTTCCA
AAAAGTACATGCACTGGCAGGAGGAGCTTATCGTAGGTGG
GACCAAGAAGAACGACAGCGGCAAACTTTTGAGTGCACAG
GCCTTTCAGACCATGTTCCAGCTCATGACCCCAAAGCAGA
TGTACGAGCACTTGAAGGGCTACGATGAGGTTTCGCACAT
CAACTGGAACGAGGACAAAGCAGCTGCCATACTAGAAGCC
TGGCAGAGGAAATACTCTGAGGCTGTCCAGCAGAGTGTGC
CGGTAAATTCCTCTCAGAAAGTGCTCACGTTCACCACCAC
CACCCTGGAAGACATCCTGAAGTCCTTCTCTGATGTCAGC
GTGATCCGGATCGCCAGTGGCTACTTGCTAATGCTTGCCT
ATGCGTGTCTGACCATGCTACGGTGGGACTGCGCCAAGTC
TCAGGGGGCGGTCGGCCTGGCTGGAGTCCTGCTGGTCACT
CTTTCTGTTGCCGCTGGATTGGGACTCTGCTCGCTTTTGG
GGATCTCCTTCAACGCCGCTACCACACAGGTGTTGCCGTT
CCTGGCTCTTGGCGTCGGGGTGGACGATGTCTTTCTCCTG
GCTCATGCTTTCAGCGAAACCGGCCAGAACAAGAGGATTC
CTTTCGAGGACCGCACTGGTGAATGTCTGAAGAGAACTGG
CGCTAGCGTAGCTTTGACCTCCATCAGTAACGTGACAGCG
TTTTTTATGGCCGCCCTTATCCCAATACCAGCACTCAGAG
CTTTCTCCCTACAGGCGGCAGTGGTGGTGGTGTTTAACTT
TGCCATGGTGCTACTCATCTTTCCTGCCATCCTCAGCATG
GACCTGTATCGCAGAGAGGACCGCCGCTTTGACATCTTCT
GCTGCTTTGTCAGCCCTTGCGCTAACCGAGTGATCCAGTT
GGAGCCACAGGCAGCGTATGCCGATTCCTCAGCGGACTCG
AGTCGCTACAGCCCTCCACCCTCCTACAGCAGCCACAGTT
TCGCCCAGCACACCCAAATCACCATGCAGTCCACCGTACA
GCTGCGCACCGAATATGACCCCAGAACACAGGCCTACTAC
ACCACGGCTGAGCCCCATTCCCACATCTCTGTCCAACCCT
ACGCCCCCAATACAAATCCTAACCCCAACCCCAACCGCAA
CAACAATAACAACAACTGCACCAACAACAGCAGCAGTGCA
GTGCCAGGAGTAGCCACTGATACAGCATCCTGCCAGAGTC
CAGATGGCGCCAGCTCCACACGAGACCTGCTATCTCAGTT
TGGGGATTCGGGTATACGTTGTCTGGATTCTCCGTATTCA
AGATGGACTTTCGCATCATTTGCTGAAAAGCACTACGCAC
CATTTCTGCTTCAGTCTACAACGAAGGTGGTGGTGATTTT
CCTGTTCCTGGCACTCCTCGGGGTCAGTCTGTACGGCACC
ACCCGCGTTCGGGATGGGTTAGAGTTGACTGACATTGTGC
CACGGGAGACGGGTGAATATGACTTCATACGTGCCCAGTT
CCGTTATTTTTCATTCTACAACATGTACGTGGTGACCCAG
AGGGCGGACTACGCACAGATCCAGCCTCAGCTCTATGAGC
TGCACCAGCGCTTTGGCTCTGTGAAGTACATCCTGCGGGA
AGAGAACGGCCAACTCCCGCGCATGTGGCTGCATTACTTC
AGAGACTGGCTGCTAGGTCTGCAGGAGGCGTTTGATAAGG
ACTGGCAGGCTGGTAGGATCACTCAGGGGAACTACAGGAA
CGGCTCGGATGATGGTGTTTTGGCCTATAAACTCCTGGTG
CAGACCGGTCGCAGGGAAAAAACGATTACCAGACAGCGGT
TGGTGAGCGCAGATGGAATAATCAACCCAAACGCTTTCTA
CATTTATTTGTCTGCCTGGGTGAGCAATGACCCAGTGGCC
TACGCCGCATCCCAGGCCAACATCCGTCCACACCCTCCAG
AGTGGCTCCATGACAGGACAGACTCCATTCCTGCCAGCAG
ACTTAACATTCCTGCCGCTGAGCCCATCGAATATGCACAG
TTTCCCTTCTACCTCAACGGGCTTCGCGAGACGCCACAGT
TCGTGGAGGCCATCGAGAGCGTTCGCGCCATCTGCAACAA
CTTCAGTCGCCAAGGTCTTCCCAGCTACCCCAACGGCTAC
CCCTTCCTCTTCTGGGAGCAGTATGTAGGCCTACGCCACT
GGCTCCTGCTTTCCATCAGCGTTGTGCTGGCCTGCACCTT
TTTGGTGTGCGCAGTCTTCCTGCTCAACCCCTGGACTGCC
GGAATCATAGTGTTGGTTCTGTCTTTAATGACAGTAGAGC
TTTTTGGTATGATGGGATTGATCGGCATCAAGCTCAGCGC
TGTGCCTGTCGTCATCCTCATCGCTTCCGTTGGCATCGGA
GTGGAGTTCACTGTTCACGTGGCACTGGCATTCCTCACAG
CCATCGGTGACAGGAACAAGCGAGCCGTTCTTGCACTGGA
ACACATGTTCGCCCCAGTGCTGGATGGAGCGTTTTCTACT
CTGCTAGGAGTCTTGATGCTGGCAGGGTCAGAGTTTGACT
TCATAGTCAGGTATTTCTTCGCTGTTTTGGCCATCCTAAC
AGTGTTAGGGGTCCTGAATGGACTGGTGCTGCTCCCAGTC
TTATTGTCCTACTTTGGCCCTTATCCTGAGGTATCTCCAG
CGGATGGGCAAAGCCGGCTGCCCACCCCGTCTCCAGAGCC
TCCGCCACAGGTGGTCCGCTTCACCATGCGTCCAAGTCAC
ACGACCCCTGGAGCTGGTTCAGACTCCTCAGACTCAGAAT
ACGGCTCTAACACAACTGTGTCCGGAATAAGCCAGGAGCT
TCAGCAGTACAACCTCCAGCCCAACAGGGGGCGATCAGCC
AGACTGGAGGAGGTGCGGATCGCCACAGCAGGACGACAAG
GCAGCCGTCAAGTTGAACTGCCAATGTTTCCTTCTTGCTC
AGATGACTCCAGACAGCAGCAAATACAGCAGCATTACAGG
TCCAGTTCTCACGATGCTGCTCCTCAGCCGTCAAAGCGAT
ATTGTAGCAGGGACCCTAAGAGGGACTTTGGGAGCGGTCA
CCCGCCTCCTCCTCACAGGCCTCGCATGGATGCTTTTGAA
ACCGCTACTGAGCCAGGAGGCCATTCAGGCCCCAACCACC
GGGACCGCTCAGGGGCCCATCGCCCCCGGTCCCACAACCC
CTACAACCCCCACCCCTCCCATCCGTCCACTGGCCCCAAT
TACTGTCAGCCCATCACAACGGTAACGGCCTCAGCTTCAG
TGACAGTCGCCGTTCATTCAGGAGTGCCCAGTCAGAGCCC
CGCGTACCCGTCCTACCCCTCCAATGACAGCTATCAGACT
TCAGGAGACGTCCACAATGACCCACACTTCTCCGACCCTC
ACGTGCCCTTTGACGAGAGCCACGACAGCTCGAAAGTGGA
GGGCATGGAGCTGCAGGATCTAGAATATGACACTGCCAAT
GTCTGCCACACAAGACCCTCCAGCTGAG

OTTDART00000025341 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000025341|OTTDARG00000020299|ZDB-GENE-980526-196 ptch1|OTTDARP00000020852 ptc2-001 LG_none CR382329.10,CR847548.8 Danio rerio protein_coding KNOWN, 4068 bp
TGGGTGGCAGGGTGAATCAGGAACTCAAGTACACACGGCA
GAAGATCGGAGAGGAGGCCATGTTTAGTCCTCAGCTCATG
ATACAGACGCCTCGTCAGGAAGGTGCTAACATTTTGACCG
TAGAGGCGCTAAAGCAGCACCTCGACTCTGCCATAAAGGC
CAGCAGAGTGCACGTTTACATGTACAACAGGCAATGGACA
TTGGAACATTTATGCTACAAATCAGGAGAACTTGTTACCG
AAACCAATGTTGTGGACCAGATCTTAGAAAAACTGCACCC
TTGTCTTGTCATCACTCCTCTGGACTGCTTCTGGGAAGGT
GCTAAGCTACATTCAGGAACATTCTATCTCCCTGGCAAAC
CCCCATTACAGTGGACCAACTTCGATCCGATGGGCTTCAT
TGCTGAGTTGAAGATGCTGAAGTATCAGGTGGACAGCTGG
GAGGAGATGCTGGTTAAAGCAGATGTGGGTCAAGGTTACA
TGAACCGGCCCTGCCTGAATCCTGCAGACCCCGACTGCCC
ATTATCAGCTCCCAACAAGAACACCACAGGGCCTTTTGAC
GTGGCTCCTGTTCTGACTGGTGGCTGCTATGGGCTTTCCA
AAAAGTACATGCACTGGCAGGAGGAGCTTATCGTAGGTGG
GACCAAGAAGAACGACAGCGGCAAACTTTTGAGTGCACAG
GCCTTTCAGACCATGTTCCAGCTCATGACCCCAAAGCAGA
TGTACGAGCACTTGAAGGGCTACGATGAGGTTTCGCACAT
CAACTGGAACGAGGACAAAGCAGCTGCCATACTAGAAGCC
TGGCAGAGGAAATACTCTGAGGCTGTCCAGCAGAGTGTGC
CGGTAAATTCCTCTCAGAAAGTGCTCACGTTCACCACCAC
CACCCTGGAAGACATCCTGAAGTCCTTCTCTGATGTCAGC
GTGATCCGGATCGCCAGTGGCTACTTGCTAATGCTTGCCT
ATGCGTGTCTGACCATGCTACGGTGGGACTGCGCCAAGTC
TCAGGGGGCGGTCGGCCTGGCTGGAGTCCTGCTGGTCACT
CTTTCTGTTGCCGCTGGATTGGGACTCTGCTCGCTTTTGG
GGATCTCCTTCAACGCCGCTACCACACAGGTGTTGCCGTT
CCTGGCTCTTGGCGTCGGGGTGGACGATGTCTTTCTCCTG
GCTCATGCTTTCAGCGAAACCGGCCAGAACAAGAGGATTC
CTTTCGAGGACCGCACTGGTGAATGTCTGAAGAGAACTGG
CGCTAGCGTAGCTTTGACCTCCATCAGTAACGTGACAGCG
TTTTTTATGGCCGCCCTTATCCCAATACCAGCACTCAGAG
CTTTCTCCCTACAGGCGGCAGTGGTGGTGGTGTTTAACTT
TGCCATGGTGCTACTCATCTTTCCTGCCATCCTCAGCATG
GACCTGTATCGCAGAGAGGACCGCCGCTTTGACATCTTCT
GCTGCTTTGTCAGCCCTTGCGCTAACCGAGTGATCCAGTT
GGAGCCACAGGCAGCGTATGCCGATTCCTCAGCGGACTCG
AGTCGCTACAGCCCTCCACCCTCCTACAGCAGCCACAGTT
TCGCCCAGCACACCCAAATCACCATGCAGTCCACCGTACA
GCTGCGCACCGAATATGACCCCAGAACACAGGCCTACTAC
ACCACGGCTGAGCCCCATTCCCACATCTCTGTCCAACCCT
ACGCCCCCAATACAAATCCTAACCCCAACCCCAACCGCAA
CAACAATAACAACAACTGCACCAACAACAGCAGCAGTGCA
GTGCCAGGAGTAGCCACTGATACAGCATCCTGCCAGAGTC
CAGATGGCGCCAGCTCCACACGAGACCTGCTATCTCAGTT
TGGGGATTCGGGTATACGTTGTCTGGATTCTCCGTATTCA
AGATGGACTTTCGCATCATTTGCTGAAAAGCACTACGCAC
CATTTCTGCTTCAGTCTACAACGAAGGTGGTGGTGATTTT
CCTGTTCCTGGCACTCCTCGGGGTCAGTCTGTACGGCACC
ACCCGCGTTCGGGATGGGTTAGAGTTGACTGACATTGTGC
CACGGGAGACGGGTGAATATGACTTCATACGTGCCCAGTT
CCGTTATTTTTCATTCTACAACATGTACGTGGTGACCCAG
AGGGCGGACTACGCACAGATCCAGCCTCAGCTCTATGAGC
TGCACCAGCGCTTTGGCTCTGTGAAGTACATCCTGCGGGA
AGAGAACGGCCAACTCCCGCGCATGTGGCTGCATTACTTC
AGAGACTGGCTGCTAGGTCTGCAGGAGGCGTTTGATAAGG
ACTGGCAGGCTGGTAGGATCACTCAGGGGAACTACAGGAA
CGGCTCGGATGATGGTGTTTTGGCCTATAAACTCCTGGTG
CAGACCGGTCGCAGGGAAAAAACGATTACCAGACAGCGGT
TGGTGAGCGCAGATGGAATAATCAACCCAAACGCTTTCTA
CATTTATTTGTCTGCCTGGGTGAGCAATGACCCAGTGGCC
TACGCCGCATCCCAGGCCAACATCCGTCCACACCCTCCAG
AGTGGCTCCATGACAGGACAGACTCCATTCCTGCCAGCAG
ACTTAACATTCCTGCCGCTGAGCCCATCGAATATGCACAG
TTTCCCTTCTACCTCAACGGGCTTCGCGAGACGCCACAGT
TCGTGGAGGCCATCGAGAGCGTTCGCGCCATCTGCAACAA
CTTCAGTCGCCAAGGTCTTCCCAGCTACCCCAACGGCTAC
CCCTTCCTCTTCTGGGAGCAGTATGTAGGCCTACGCCACT
GGCTCCTGCTTTCCATCAGCGTTGTGCTGGCCTGCACCTT
TTTGGTGTGCGCAGTCTTCCTGCTCAACCCCTGGACTGCC
GGAATCATAGTGTTGGTTCTGTCTTTAATGACAGTAGAGC
TTTTTGGTATGATGGGATTGATCGGCATCAAGCTCAGCGC
TGTGCCTGTCGTCATCCTCATCGCTTCCGTTGGCATCGGA
GTGGAGTTCACTGTTCACGTGGCACTGGCATTCCTCACAG
CCATCGGTGACAGGAACAAGCGAGCCGTTCTTGCACTGGA
ACACATGTTCGCCCCAGTGCTGGATGGAGCGTTTTCTACT
CTGCTAGGAGTCTTGATGCTGGCAGGGTCAGAGTTTGACT
TCATAGTCAGGTATTTCTTCGCTGTTTTGGCCATCCTAAC
AGTGTTAGGGGTCCTGAATGGACTGGTGCTGCTCCCAGTC
TTATTGTCCTACTTTGGCCCTTATCCTGAGGTATCTCCAG
CGGATGGGCAAAGCCGGCTGCCCACCCCGTCTCCAGAGCC
TCCGCCACAGGTGGTCCGCTTCACCATGCGTCCAAGTCAC
ACGACCCCTGGAGCTGGTTCAGACTCCTCAGACTCAGAAT
ACGGCTCTAACACAACTGTGTCCGGAATAAGCCAGGAGCT
TCAGCAGTACAACCTCCAGCCCAACAGGGGGCGATCAGCC
AGACTGGAGGAGGTGCGGATCGCCACAGCAGGACGACAAG
GCAGCCGTCAAGTTGAACTGCCAATGTTTCCTTCTTGCTC
AGATGACTCCAGACAGCAGCAAATACAGCAGCATTACAGG
TCCAGTTCTCACGATGCTGCTCCTCAGCCGTCAAAGCGAT
ATTGTAGCAGGGACCCTAAGAGGGACTTTGGGAGCGGTCA
CCCGCCTCCTCCTCACAGGCCTCGCATGGATGCTTTTGAA
ACCGCTACTGAGCCAGGAGGCCATTCAGGCCCCAACCACC
GGGACCGCTCAGGGGCCCATCGCCCCCGGTCCCACAACCC
CTACAACCCCCACCCCTCCCATCCGTCCACTGGCCCCAAT
TACTGTCAGCCCATCACAACGGTAACGGCCTCAGCTTCAG
TGACAGTCGCCGTTCATTCAGGAGTGCCCAGTCAGAGCCC
CGCGTACCCGTCCTACCCCTCCAATGACAGCTATCAGACT
TCAGGAGACGTCCACAATGACCCACACTTCTCCGACCCTC
ACGTGCCCTTTGACGAGAGCCACGACAGCTCGAAAGTGGA
GGGCATGGAGCTGCAGGATCTAGAATATGACACTGCCAAT
GTCTGCCACACAAGACCCTCCAGCTGAG

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations