Transcript

ckbb-203

ID

ZDB-TSCRIPT-090929-476

Name

ckbb-203 Nomenclature History

Previous Names

ckbb-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

ckbb (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000142618 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000142618.2|gene_biotype:protein_coding|ENSDARG00000043257.8 transcript_biotype:nonsense_mediated_decay gene_symbol:ckbb cdna chromosome:GRCz11:20:20817229:20821789:-1
CTGGACACCATTATCAGTCTTTGTGTGGTTTCTGGTGGAC
TTTAGGAAGGATTAATTCCGCTTTCCCAAAGAAAATCGGT
ATAAGGTAGACGCAATCATGCCTTTCGGTAACACTCACAA
TCTGCTGAAGATGAACTACTCCGCCGAGCAGGAGTATCCC
GACCTCACCAAGCACAACAACCACATGGCGAAGGTGCTGA
CGCCCGAGATGTACGCAAACCTTAGGGACAAACAAACCCC
CAGCGGATTTACCCTGGATGACGTCATTCAAACCGGAGTT
GACAATCCAGGACATCCTTTCATCATGACGGTGGGCTGCG
TGGCCGGAGATGAGGAGACATACGATGTGTTTAAAGAGCT
CCTGGACCCCGTCATTGAGGACCGCCATGGTGGATATAAA
CCCACAGACAAGCACAAGACTGATCTGAACCCAGACAACC
TCAAGTGTGGGTGAATGAGGAAGACCATCTACGTGTCATC
TCCATGCAGAAAGGTGGCAACATGAGGGAAGTCTTCAATC
GCTTCTGCACAGGCCTCACAAAGATTGAGGAACTGTTTAA
AGAGAAGGGCCATGAGTTTATGTGGAACGAGCACTTGGGC
TACGTCTTAACCTGCCCCTCCAACCTGGGCACAGGGTTGC
GTGGTGGCGTTCATGTCAAACTCCCTAACGTAAGCAAGCA
TGAGAAGTTTGGTGAGATTCTTAAGCGACTCCGGCTTCAA
AAGCGTGGAACAG

OTTDART00000005302 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000005302|OTTDARG00000004927|ZDB-GENE-020103-2 ckbb|OTTDARP00000045537 ckb-003 LG_ BX248125.10 Danio rerio protein_coding KNOWN, 733 bp
CTGGACACCATTATCAGTCTTTGTGTGGTTTCTGGTGGAC
TTTAGGAAGGATTAATTCCGCTTTCCCAAAGAAAATCGGT
ATAAGGTAGACGCAATCATGCCTTTCGGTAACACTCACAA
TCTGCTGAAGATGAACTACTCCGCCGAGCAGGAGTATCCC
GACCTCACCAAGCACAACAACCACATGGCGAAGGTGCTGA
CGCCCGAGATGTACGCAAACCTTAGGGACAAACAAACCCC
CAGCGGATTTACCCTGGATGACGTCATTCAAACCGGAGTT
GACAATCCAGGACATCCTTTCATCATGACGGTGGGCTGCG
TGGCCGGAGATGAGGAGACATACGATGTGTTTAAAGAGCT
CCTGGACCCCGTCATTGAGGACCGCCATGGTGGATATAAA
CCCACAGACAAGCACAAGACTGATCTGAACCCAGACAACC
TCAAGTGTGGGTGAATGAGGAAGACCATCTACGTGTCATC
TCCATGCAGAAAGGTGGCAACATGAGGGAAGTCTTCAATC
GCTTCTGCACAGGCCTCACAAAGATTGAGGAACTGTTTAA
AGAGAAGGGCCATGAGTTTATGTGGAACGAGCACTTGGGC
TACGTCTTAACCTGCCCCTCCAACCTGGGCACAGGGTTGC
GTGGTGGCGTTCATGTCAAACTCCCTAACGTAAGCAAGCA
TGAGAAGTTTGGTGAGATTCTTAAGCGACTCCGGCTTCAA
AAGCGTGGAACAG

Related Transcripts

Transcripts related to ckbb

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ckbb-203	Ensembl	733 nt
aberrant processed transcript	ckbb-205 (1) Ensembl	Ensembl	791 nt	Select Tool
mRNA	ckbb-201 (1) Ensembl	Ensembl	1,464 nt	Select Tool
mRNA	ckbb-204 (1) Ensembl	Ensembl	881 nt	Select Tool
mRNA	ckbb-207 (1) Ensembl	Ensembl	861 nt	Select Tool
ncRNA	ckbb-004 (1) Ensembl	Ensembl	597 nt	Select Tool
ncRNA	ckbb-005 (1) Ensembl	Ensembl	947 nt	Select Tool
ncRNA	ckbb-006 (1) Ensembl	Ensembl	516 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations